RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 OR4K3Q96R72 315 aa12.01□□□□□ -0.49
PAAF1-215ENST00000544909 NAA50Q9GZZ1 169 aaKnown RBP12.01□□□□□ -0.49
PAAF1-215ENST00000544909 REEP4Q9H6H4 257 aa12.01□□□□□ -0.49
PAAF1-215ENST00000544909 THUMPD1Q9NXG2 353 aaKnown RBP12.01□□□□□ -0.49
PAAF1-215ENST00000544909 MBD1Q9UIS9 605 aaPredicted RBP12.01□□□□□ -0.49
PAAF1-215ENST00000544909 FZD4Q9ULV1 537 aa12.01□□□□□ -0.49
PAAF1-215ENST00000544909 GPR34Q9UPC5 381 aa12.01□□□□□ -0.49
PAAF1-215ENST00000544909 MTCL1Q9Y4B5 1905 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 CLDN24A6NM45 220 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 GABRR3A8MPY1 467 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CLDN25C9JDP6 229 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 H3BM21 787 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 RGS10O43665 173 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 BNIP3LO60238 219 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 BCAS1O75363 584 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 LRATO95237 230 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CXCL14O95715 111 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 LAMP1P11279 417 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 SYN1P17600 705 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 HTR1BP28222 390 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 SERPINB1P30740 379 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 GP2P55259 537 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 SELENOWP63302 87 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 RAE1P78406 368 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 KCNJ10P78508 379 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 NPRL3Q12980 569 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 BNIP3Q12983 259 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 GTF2H3Q13889 308 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ZNF846Q147U1 533 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ZNF630Q2M218 657 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 TRIM40Q6P9F5 258 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 FAM92BQ6ZTR7 304 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 B3GNT8Q7Z7M8 397 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ZNF554Q86TJ5 538 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 C1orf52Q8N6N3 182 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 AP2M1Q96CW1 435 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 COX4I2Q96KJ9 171 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 COQ10AQ96MF6 247 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 MTERF1Q99551 399 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 ABCG8Q9H221 673 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 FBXO8Q9NRD0 319 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 VNN3Q9NY84 501 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 CCL26Q9Y258 94 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 A3GALT2U3KPV4 340 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 U3KQV3 271 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 HOXC11O43248 304 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 PCDH7O60245 1069 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 TBX19O60806 448 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 XYLBO75191 536 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 MOSPD3O75425 235 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 SEMA3DO95025 777 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 C1orf105O95561 183 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 AGXTP21549 392 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 PRKACGP22612 351 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CCR2P41597 374 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CLK3P49761 638 aaKnown RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 KCNC4Q03721 635 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 RPA4Q13156 261 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 TBCEQ15813 527 aaPredicted RBP12□□□□□ -0.49
PAAF1-215ENST00000544909 LY6G5CQ5SRR4 150 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 UBE2UQ5VVX9 321 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 C16orf87Q6PH81 154 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CEP68Q76N32 757 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 P2RY8Q86VZ1 359 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ATG16L2Q8NAA4 619 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 TMIEQ8NEW7 156 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 SH3KBP1Q96B97 665 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 PKP4Q99569 1192 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 EBPLQ9BY08 206 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 DPP7Q9UHL4 492 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 CD84Q9UIB8 345 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ICKQ9UPZ9 632 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 DYRK1BQ9Y463 629 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 ZNF451Q9Y4E5 1061 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
PAAF1-215ENST00000544909 OR2AG2A6NM03 316 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 PI15O43692 258 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 VEGFDO43915 354 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 TNFRSF21O75509 655 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 KRT75O95678 551 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 C1GALT1C1LP0DN25 315 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 CD247P20963 164 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 ITGB7P26010 798 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 HSD17B2P37059 387 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 MAGEA8P43361 318 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 CTSCP53634 463 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 TUBA1BP68363 451 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 UBE3AQ05086 875 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 TMED1Q13445 227 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 EIF4HQ15056 248 aaKnown RBP11.99□□□□□ -0.49
PAAF1-215ENST00000544909 NPTX1Q15818 432 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 DGUOKQ16854 277 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 FBXO43Q4G163 708 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 ARSIQ5FYB1 569 aa11.99□□□□□ -0.49
PAAF1-215ENST00000544909 CRB2Q5IJ48 1285 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms