RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LBX1P52954 281 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CASP9P55211 416 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 RPL36AP83881 106 aaKnown RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 KIF5AQ12840 1032 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 GTF2H2Q13888 395 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PDK1Q15118 436 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 NONOQ15233 471 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ACKR1Q16570 336 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SGCBQ16585 318 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PTGISQ16647 500 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PHKG1Q16816 387 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 DUOXA1Q1HG43 343 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 DEFB115Q30KQ5 88 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CCDC40Q4G0X9 1142 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SYT14P1Q58G82 188 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PRAMEF8Q5VWM4 474 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 FAM46CQ5VWP2 391 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 GTF2H2CQ6P1K8 395 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CREB3L2Q70SY1 520 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ANKRD46Q86W74 232 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 TMPRSS12Q86WS5 348 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SFR1Q86XK3 245 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 LGI2Q8N0V4 545 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 BATF2Q8N1L9 274 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SFRP1Q8N474 314 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 RASGEF1AQ8N9B8 481 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 OR4K1Q8NGD4 311 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 TMED6Q8WW62 240 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 NSL1Q96IY1 281 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 LMLNQ96KR4 655 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 GDAP1L1Q96MZ0 367 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 FAM111AQ96PZ2 611 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 MYADMQ96S97 322 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 C17orf62Q9BQA9 187 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ATG101Q9BSB4 218 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 TEX13AQ9BXU3 409 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SLC2A11Q9BYW1 496 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 NACAP1Q9BZK3 213 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 TRIM7Q9C029 511 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 VPS33BQ9H267 617 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 RWDD1Q9H446 243 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 RNF121Q9H920 327 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ACKR4Q9NPB9 350 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PPANQ9NQ55 473 aaKnown RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SMARCAL1Q9NZC9 954 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF224Q9NZL3 707 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ACTR3BQ9P1U1 418 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 POU2F3Q9UKI9 436 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 KIAA1210Q9ULL0 1709 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CICQ96RK0 1608 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 LTN1O94822 1766 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PKD1L3Q7Z443 1732 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 KTN1Q86UP2 1357 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 A0A0A6YYC8 382 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 TRAV24A0A0B4J272 114 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 A0A0G2JPF8 293 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 FEZF1A0PJY2 475 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 DENND3A2RUS2 1198 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ARHGAP42A6NI28 874 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 LILRA5A6NI73 299 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PRR32B1ATL7 298 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 HNRNPCL3B7ZW38 293 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 TMEM150CB9EJG8 249 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 I3L1I5 382 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 GAPDHSO14556 408 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 NDC80O14777 642 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 VEGFDO43915 354 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 OR10H2O60403 315 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 NOL3O60936 208 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 WDR1O75083 606 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 KDM4BO94953 1096 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 GUCA1CO95843 209 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SERPING1P05155 500 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ALPPP05187 535 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 TFAP2AP05549 437 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 MMP10P09238 476 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 HNRNPCL4P0DMR1 293 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ALPPL2P10696 532 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 MYOD1P15172 320 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 DPEP1P16444 411 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF12P17014 697 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF23P17027 643 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PTGER4P35408 488 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 AHRP35869 848 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 CD86P42081 329 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 GSDMDP57764 484 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 YBEYP58557 167 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 KLC1Q07866 573 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PPP1R8Q12972 351 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 LCP2Q13094 533 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PTPN14Q15678 1187 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ODF4Q2M2E3 257 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 TEX35Q5T0J7 233 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PODNL1Q6PEZ8 512 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms