RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ENO2P09104 434 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 ARSAP15289 507 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CAPN3P20807 821 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 BCAP31P51572 246 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 OR2B6P58173 313 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SRSF11Q05519 484 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CHRNA6Q15825 494 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CMPK2Q5EBM0 449 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CARD16Q5EG05 197 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CYB5D2Q8WUJ1 264 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 POP5Q969H6 163 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 ALG14Q96F25 216 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 MAGEB10Q96LZ2 347 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 DERL2Q9GZP9 239 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM138Q9NPI0 162 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 PCDHB3Q9Y5E6 796 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 COL4A4P53420 1690 aaPredicted RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 FBP2O00757 339 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 GREM1O60565 184 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 DNAJA1P31689 397 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 KCNC1P48547 511 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PCDH1Q08174 1060 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 TARDBPQ13148 414 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PTCHD3Q3KNS1 767 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 KRTCAP2Q8N6L1 136 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 C12orf76Q8N812 135 aaPredicted RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 MYLIPQ8WY64 445 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SPATA5L1Q9BVQ7 753 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 FAIM2Q9BWQ8 316 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 GULP1Q9UBP9 304 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 INTS6Q9UL03 887 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 ING4Q9UNL4 249 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PCDHGA7Q9Y5G6 932 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 CROCCQ5TZA2 2017 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 NME6O75414 186 aaPredicted RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 CCNB2O95067 398 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PFKLP17858 780 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 RPL4P36578 427 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 OR1E2P47887 323 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PLA2G16P53816 162 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 GPM6BQ13491 265 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 TUBB3Q13509 450 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF730Q6ZMV8 503 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SNX20Q7Z614 316 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SYVN1Q86TM6 617 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 TSPAN33Q86UF1 283 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 OR8H1Q8NGG4 311 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 ITFG2Q969R8 447 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 VMP1Q96GC9 406 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 RUVBL1Q9Y265 456 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 TRBV23OR9-2A0A075B6M9 112 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 GRXCR1A8MXD5 290 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF195O14628 629 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 IFI30P13284 250 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SLC13A2Q13183 592 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF404Q494X3 552 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 LRRC66Q68CR7 880 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 C1orf52Q8N6N3 182 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SORCS1Q8WY21 1168 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PPP1R14BQ96C90 147 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PYURFQ96I23 114 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 POLR2J3Q9H1A7 115 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 IGFLR1Q9H665 355 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 DUS2Q9NX74 493 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 THUMPD1Q9NXG2 353 aaKnown RBP9.66□□□□□ -0.86
TRAF1-202ENST00000540010 VPS29Q9UBQ0 182 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
TRAF1-202ENST00000540010 SLC30A4O14863 429 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CSF2P04141 144 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CA3P07451 260 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CDK4P11802 303 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 PRPS1L1P21108 318 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MAPK12P53778 367 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 RAB15P59190 212 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 NDUFAF6Q330K2 333 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MED27Q6P2C8 311 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SMARCD3Q6STE5 483 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 GHDCQ8N2G8 530 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TCAIMQ8N3R3 496 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF433Q8N7K0 673 aaPredicted RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF420Q8TAQ5 688 aaPredicted RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 KCNJ9Q92806 393 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 BARD1Q99728 777 aaKnown RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 RHCGQ9UBD6 479 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SPIN1Q9Y657 262 aaPredicted RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CACNA1CQ13936 2221 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 QSOX1O00391 747 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ZW10O43264 779 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ATG13O75143 517 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 GUCY1B2O75343 617 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SOX14O95416 240 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 DHFRP00374 187 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SLC35G4P0C7Q5 338 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms