RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CKMT1AP12532 417 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 DRD2P14416 443 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 PPIBP23284 216 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 GRIA3P42263 894 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 MLLT3P42568 568 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 CCR10P46092 362 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 HSD11B2P80365 405 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 KLF10Q13118 480 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 SLC9A5Q14940 896 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TCEA2Q15560 299 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 FAM214AQ32MH5 1076 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 CATSPEREQ5SY80 951 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 DEPDC1Q5TB30 811 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 VWA5B1Q5TIE3 1220 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 IL23RQ5VWK5 629 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 NOXRED1Q6NXP6 359 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 IRGCQ6NXR0 463 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 PRSS42Q7Z5A4 293 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 PAQR7Q86WK9 346 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 GPR135Q8IZ08 494 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TMEM132CQ8N3T6 1108 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TRIML2Q8N7C3 387 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 C19orf47Q8N9M1 422 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 KYQ8NBH2 561 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TNIP2Q8NFZ5 429 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 NT5CQ8TCD5 201 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 SLC13A3Q8WWT9 602 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TESCQ96BS2 214 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 OR2A14Q96R47 310 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 OR52B2Q96RD2 323 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 MTERF1Q99551 399 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 HOPXQ9BPY8 73 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 GTPBP2Q9BX10 602 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 ACPTQ9BZG2 426 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 REXO4Q9GZR2 422 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 NCDNQ9UBB6 729 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 ZNF225Q9UK10 706 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 PCDHGB4Q9UN71 923 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 CDC14AQ9UNH5 594 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 CORO2BQ9UQ03 480 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 COPG1Q9Y678 874 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 SPTBN5Q9NRC6 3674 aaKnown RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 EME2A4GXA9 379 aaPredicted RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 CCDC154A6NI56 674 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MAGEB17A8MXT2 336 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 BTN3A3O00478 584 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 NDUFS4O43181 175 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 PCDH7O60245 1069 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 SDC3O75056 442 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 RASSF9O75901 435 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 CPNE6O95741 557 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 HBQ1P09105 142 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 ANXA4P09525 319 aaPredicted RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 ANKRD34CP0C6C1 535 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 HOXB6P17509 224 aaKnown RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 ENGP17813 658 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 PTPN4P29074 926 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 ALDH4A1P30038 563 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 TIA1P31483 386 aaKnown RBP eCLIP11.29□□□□□ -0.6
VTN-202ENST00000539746 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 SSR2P43308 183 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MAPK12P53778 367 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 FOXA1P55317 472 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 CLDN8P56748 225 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 TXNL4AP83876 142 aaKnown RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 E2F1Q01094 437 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 ACY1Q03154 408 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 BIKQ13323 160 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 AGKQ53H12 422 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 CCNYL2Q5T2Q4 361 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 HACD2Q6Y1H2 254 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 Q6ZSR9 355 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 RNF44Q7L0R7 432 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MAVSQ7Z434 540 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 METTL4Q8N3J2 472 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 OR2L5Q8NG80 312 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 PPP1R36Q96LQ0 422 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 CATSPER2Q96P56 530 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 CCDC106Q9BWC9 280 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 MS4A8Q9BY19 250 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 TUBB1Q9H4B7 451 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MIEF1Q9NQG6 463 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 TMEM74BQ9NUR3 256 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 SOHLH2Q9NX45 425 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms