RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 CCDC177Q9NQR7 707 aaPredicted RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 PNPLA3Q9NST1 481 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 ZNF639Q9UID6 485 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 ASF1AQ9Y294 204 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 SLC17A4Q9Y2C5 497 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 EVPLLA8MZ36 301 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 H0Y8X5 98 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 DLGAP1O14490 977 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 EI24O14681 340 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 RETP07949 1114 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 ANXA4P09525 319 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 GZMMP51124 257 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 STARD6P59095 220 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 RPS13P62277 151 aaKnown RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 UBXN2BQ14CS0 331 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 HIST2H2ACQ16777 129 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 CATSPEREQ5SY80 951 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 HIST2H2AA3Q6FI13 130 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 ADNP2Q6IQ32 1131 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 ISLR2Q6UXK2 745 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 PDZD3Q86UT5 571 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 LRRC56Q8IYG6 542 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 CDC26Q8NHZ8 85 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 FBXO30Q8TB52 745 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 RAD51AP1Q96B01 352 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 REXO5Q96IC2 774 aaKnown RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 BMFQ96LC9 184 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 ADI1Q9BV57 179 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 PADI4Q9UM07 663 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 PLEKHM1Q9Y4G2 1056 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 DNMT3AQ9Y6K1 912 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 PCM1Q15154 2024 aa19.48■□□□□ 0.71
PACSIN3-211ENST00000539589 FOXE1O00358 373 aaPredicted RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 FPGTO14772 594 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 MAP3K13O43283 966 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 CREG1O75629 220 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 PGM3O95394 542 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 B3GALT4O96024 378 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 PABPC4LP0CB38 370 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 ZNF23P17027 643 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 RPL5P46777 297 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 MERTKQ12866 999 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SLBPQ14493 270 aaKnown RBP eCLIP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 TPRG1LQ5T0D9 272 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 LAS2Q8IYD9 372 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SYNPOQ8N3V7 929 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SETD7Q8WTS6 366 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SLC5A11Q8WWX8 675 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 WNT16Q9UBV4 365 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 GON4LQ3T8J9 2241 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 LRRC72A6NJI9 287 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 GPR89AB7ZAQ6 455 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SCAMP2O15127 329 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 KMOO15229 486 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 LATO43561 262 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 PI15O43692 258 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 IGLV3-19P01714 112 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 GPR89BP0CG08 455 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 HOXB6P17509 224 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 RPS9P46781 194 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 RAE1P78406 368 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 LAPTM5Q13571 262 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 SF1Q15637 639 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 PYCR3Q53H96 274 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 METRNLQ641Q3 311 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 NXPE4Q6UWF7 544 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 ENPP6Q6UWR7 440 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 CHST15Q7LFX5 561 aaPredicted RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 FRMD1Q8N878 549 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 C6orf106Q9H6K1 298 aaPredicted RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 DCAF13Q9NV06 445 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 NDUFA13Q9P0J0 144 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 CYP8B1Q9UNU6 501 aa19.47■□□□□ 0.71
PACSIN3-211ENST00000539589 USP34Q70CQ2 3546 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 PIPSLA2A3N6 862 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 FAM170BA6NMN3 283 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SCN2BO60939 215 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SH3BGRLO75368 114 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 PRSS23O95084 383 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 H6PDO95479 791 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SEMA4FO95754 770 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 KELP23276 732 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 WNT3P56703 355 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 LRRC32Q14392 662 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 THEMIS2Q5TEJ8 643 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 FKBP9P1Q75LS8 142 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 LMNTD1Q8N9Z9 388 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SLC47A1Q96FL8 570 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 NTN4Q9HB63 628 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 FGF22Q9HCT0 170 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SMPD3Q9NY59 655 aaPredicted RBP19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SUFUQ9UMX1 484 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SH2B3Q9UQQ2 575 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 SMIM31A0A1B0GVY4 71 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 GNG14A0A1W2PPG7 69 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 EPN2O95208 641 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 TIA1P31483 386 aaKnown RBP eCLIP19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 HPCAL1P37235 193 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 CPTPQ5TA50 214 aa19.46■□□□□ 0.71
PACSIN3-211ENST00000539589 GALNT18Q6P9A2 607 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms