RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CAMKVQ8NCB2 501 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 C2CD4AQ8NCU7 369 aaPredicted RBP11.81□□□□□ -0.52
VAMP1-206ENST00000538970 DNAJB8Q8NHS0 232 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 SUN3Q8TAQ9 357 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PBKQ96KB5 322 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 SGPP1Q9BX95 441 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 ATG10Q9H0Y0 220 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PARVBQ9HBI1 364 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 ANKHQ9HCJ1 492 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 STMN3Q9NZ72 180 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 HEATR5BQ9P2D3 2071 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 CNTRLQ7Z7A1 2325 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 FEZF1A0PJY2 475 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 OR2W5A6NFC9 320 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 PRSS44E7EML9 344 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 SLC16A5O15375 505 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 RDH16O75452 317 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 CDH1P12830 882 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 CCND1P24385 295 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 GABRB3P28472 473 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 FNTAP49354 379 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 RGS4P49798 205 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 AGTR2P50052 363 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 CDKN2DP55273 166 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 PMP22Q01453 160 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 SRSF11Q05519 484 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 PHKG1Q16816 387 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 ACER2Q5QJU3 275 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 RBM20Q5T481 1227 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 RNASEH2BQ5TBB1 312 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 H3F3CQ6NXT2 135 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 LCTLQ6UWM7 567 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 SLC26A11Q86WA9 606 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 PPIL6Q8IXY8 311 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 BEST3Q8N1M1 668 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 MYO1HQ8N1T3 1032 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 NAP1L3Q99457 506 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 RBCK1Q9BYM8 510 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 FAM129AQ9BZQ8 928 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 COPG2Q9UBF2 871 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 SEC14L3Q9UDX4 400 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 MDC1Q14676 2089 aaKnown RBP11.8□□□□□ -0.52
VAMP1-206ENST00000538970 HIVEP1P15822 2718 aa11.8□□□□□ -0.52
VAMP1-206ENST00000538970 TRGV8A0A0C4DH27 118 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 A8MUI8 341 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 LCMT2O60294 686 aaKnown RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 TSPAN12O95859 305 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 SLC35G6P0C7Q6 338 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 MYBL2P10244 700 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 RHAGQ02094 409 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 NAE1Q13564 534 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 EXT1Q16394 746 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ZXDCQ2QGD7 858 aaPredicted RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ZNF766Q5HY98 468 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 FCRLBQ6BAA4 426 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 CAPN13Q6MZZ7 669 aaPredicted RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 PAQR3Q6TCH7 311 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 PALM2Q8IXS6 379 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 MDS2Q8NDY4 140 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 M1APQ8TC57 530 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 SLC13A3Q8WWT9 602 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ITLN2Q8WWU7 325 aaPredicted RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ALKBH8Q96BT7 664 aaKnown RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 LINGO1Q96FE5 620 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 CCDC120Q96HB5 630 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 NPAS2Q99743 824 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 SUCOQ9UBS9 1254 aaKnown RBP11.79□□□□□ -0.52
VAMP1-206ENST00000538970 NAALAD2Q9Y3Q0 740 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 PCDHGB6Q9Y5F9 930 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 SLC22A7Q9Y694 548 aa11.79□□□□□ -0.52
VAMP1-206ENST00000538970 ZNF860A6NHJ4 632 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 BANF1O75531 89 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 CDC123O75794 336 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 HIST1H2AGP0C0S8 130 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 NPPBP16860 134 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 HIST1H2ADP20671 130 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 IL10P22301 178 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 GRK3P35626 688 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 CA7P43166 264 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 MEF2AQ02078 507 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 ART3Q13508 389 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 TUBA3CQ13748 450 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 ABRAXAS2Q15018 415 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SFT2D3Q587I9 215 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SPANXN3Q5MJ09 141 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 TUBA3EQ6PEY2 450 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms