RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FBXO10Q9UK96 956 aa14.04□□□□□ -0.16
CDCA3-207ENST00000538862 MAPRE3Q9UPY8 281 aa14.04□□□□□ -0.16
CDCA3-207ENST00000538862 ERGIC3Q9Y282 383 aa14.04□□□□□ -0.16
CDCA3-207ENST00000538862 ZDBF2Q9HCK1 2354 aa14.04□□□□□ -0.16
CDCA3-207ENST00000538862 SLC22A1O15245 554 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 XPNPEP2O43895 674 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SULT1C4O75897 302 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 AP2A2O94973 939 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 GABARAPO95166 117 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TFPTP0C1Z6 253 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 HSD3B1P14060 373 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 HSD3B2P26439 372 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZXDAP98168 799 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 IRF8Q02556 426 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 OCA2Q04671 838 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SLC44A4Q53GD3 710 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 MFSD4BQ5TF39 518 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF621Q6ZSS3 439 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 GALNT5Q7Z7M9 940 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TSPYL5Q86VY4 417 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 PTOV1Q86YD1 416 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SLC22A15Q8IZD6 547 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 CENPSQ8N2Z9 138 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 OR7A2PQ8NGA2 310 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ASZ1Q8WWH4 475 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TCEAL4Q96EI5 215 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ASPSCR1Q9BZE9 553 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZDHHC6Q9H6R6 413 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 NECTIN3Q9NQS3 549 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SPATA6Q9NWH7 488 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 CORINQ9Y5Q5 1042 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 MYO1GB0I1T2 1018 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 BNIP3LO60238 219 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SLCO2B1O94956 709 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 UGT2B4P06133 528 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 OCM2P0CE71 109 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 OCMP0CE72 109 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 COX7A2P14406 83 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF24P17028 368 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF30P17039 623 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 NAT1P18440 290 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 HLA-FP30511 346 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 MLLT10P55197 1068 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 PCDH1Q08174 1060 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SIM2Q14190 667 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF846Q147U1 533 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 NPTX1Q15818 432 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 RGS21Q2M5E4 152 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TMEM31Q5JXX7 168 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 DPY19L3Q6ZPD9 716 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 HORMAD1Q86X24 394 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TTC29Q8NA56 475 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 EDAQ92838 391 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 FGF13Q92913 245 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 VMP1Q96GC9 406 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 SH3YL1Q96HL8 342 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 BARD1Q99728 777 aaKnown RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 LRFN3Q9BTN0 628 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 ATG10Q9H0Y0 220 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 RIBC2Q9H4K1 309 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 KCNK12Q9HB15 430 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 CCNB1IP1Q9NPC3 277 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 PDP1Q9P0J1 537 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 NDRG4Q9ULP0 352 aaKnown RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 TDRKHQ9Y2W6 561 aaKnown RBP14.03□□□□□ -0.16
CDCA3-207ENST00000538862 PCDHB11Q9Y5F2 797 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 GMPPBQ9Y5P6 360 aa14.03□□□□□ -0.16
CDCA3-207ENST00000538862 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 CLDN25C9JDP6 229 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 J3QRK9 145 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 MYO1DO94832 1006 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 GSTM1P09488 218 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 LAMP2P13473 410 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 PTPN2P17706 415 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 HNF4AP41235 474 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 CCR2P41597 374 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 ITGA1P56199 1179 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 DCDC1P59894 354 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 PHEXP78562 749 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 MVKQ03426 396 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 KCNC4Q03721 635 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 SYT6Q5T7P8 510 aaPredicted RBP14.02□□□□□ -0.16
CDCA3-207ENST00000538862 CMTM8Q8IZV2 173 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 SYNPOQ8N3V7 929 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 SVOPQ8N4V2 548 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 ATL1Q8WXF7 558 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 ELMO1Q92556 727 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 C11orf24Q96F05 449 aaPredicted RBP14.02□□□□□ -0.16
CDCA3-207ENST00000538862 HSH2DQ96JZ2 352 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 EBPLQ9BY08 206 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 BRF2Q9HAW0 419 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 TRPV5Q9NQA5 729 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 ERVK-18Q9QC07 812 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 CORO2BQ9UQ03 480 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 COQ6Q9Y2Z9 468 aa14.02□□□□□ -0.16
CDCA3-207ENST00000538862 MRPS23Q9Y3D9 190 aaKnown RBP14.02□□□□□ -0.16
CDCA3-207ENST00000538862 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms