RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SNX19Q92543 992 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 POP5Q969H6 163 aaKnown RBP14.22□□□□□ -0.13
ATL3-203ENST00000538786 RNF145Q96MT1 663 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 CENPKQ9BS16 269 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 UGT2B28Q9BY64 529 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 REEP4Q9H6H4 257 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 MVB12BQ9H7P6 319 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 NT5DC2Q9H857 520 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 C8orf4Q9NR00 106 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 CUEDC1Q9NWM3 386 aaPredicted RBP14.22□□□□□ -0.13
ATL3-203ENST00000538786 MMP17Q9ULZ9 603 aa14.22□□□□□ -0.13
ATL3-203ENST00000538786 C7orf72A4D263 438 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 A6NHS1 94 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 ANKDD1BA6NHY2 528 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 SAC3D1A6NKF1 404 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 PDZK1P1A8MUH7 402 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 CLIC1O00299 241 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 YY2O15391 372 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 SMNDC1O75940 238 aaKnown RBP eCLIP14.21□□□□□ -0.13
ATL3-203ENST00000538786 EPN2O95208 641 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 LDLRP01130 860 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 RETP07949 1114 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 PSMB5P28074 263 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 ACSL1P33121 698 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
ATL3-203ENST00000538786 CLDN2P57739 230 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 REEP5Q00765 189 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 CCINQ13939 588 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 KRT33BQ14525 404 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 C6orf52Q5T4I8 152 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 ZNF621Q6ZSS3 439 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 CLECL1Q8IZS7 167 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 C10orf111Q8N326 155 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 WDR48Q8TAF3 677 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 MSANTD3Q96H12 275 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 OR2M4Q96R27 311 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 C9orf16Q9BUW7 83 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 BHLHE41Q9C0J9 482 aaPredicted RBP14.21□□□□□ -0.13
ATL3-203ENST00000538786 CARS2Q9HA77 564 aaKnown RBP14.21□□□□□ -0.13
ATL3-203ENST00000538786 MYNNQ9NPC7 610 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 AHSPQ9NZD4 102 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 DLGAP2Q9P1A6 1054 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 EXO1Q9UQ84 846 aaKnown RBP14.21□□□□□ -0.13
ATL3-203ENST00000538786 ERVK-11Q9UQG0 969 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 AK5Q9Y6K8 562 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 V9GYQ6 96 aa14.21□□□□□ -0.13
ATL3-203ENST00000538786 TCRBV21S2A2A0A5A6 115 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 LRRC72A6NJI9 287 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 SHISA7A6NL88 538 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 SOCS2O14508 198 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 SEMA3DO95025 777 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 ZCCHC18P0CG32 403 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 ENGP17813 658 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 GPX2P18283 190 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 PKLRP30613 574 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 CHN2P52757 468 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 CHRNB3Q05901 458 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 SLC14A1Q13336 389 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 NFATC4Q14934 902 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 TMTC4Q5T4D3 741 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 UGT2A3Q6UWM9 527 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 R3HCC1LQ7Z5L2 792 aaKnown RBP14.21□□□□□ -0.14
ATL3-203ENST00000538786 SLC9B2Q86UD5 537 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 EPHX4Q8IUS5 362 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 OR2L8Q8NGY9 312 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 C16orf78Q8WTQ4 265 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 FAM3CQ92520 227 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 FAM162AQ96A26 154 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 YY1AP1Q9H869 796 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 CD93Q9NPY3 652 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 PRDM8Q9NQV8 689 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 ATAD3AQ9NVI7 634 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 GMEB1Q9Y692 573 aa14.21□□□□□ -0.14
ATL3-203ENST00000538786 OR52A4PA6NMU1 304 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 H7BY64 318 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 RNASET2O00584 256 aaKnown RBP14.2□□□□□ -0.14
ATL3-203ENST00000538786 CREG1O75629 220 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 CPSF4O95639 269 aaKnown RBP14.2□□□□□ -0.14
ATL3-203ENST00000538786 GBAP04062 536 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 KLK1P06870 262 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 GABRG2P18507 467 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 HNRNPA2B1P22626 353 aaKnown RBP14.2□□□□□ -0.14
ATL3-203ENST00000538786 PDE7AQ13946 482 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 RPE65Q16518 533 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 KHDRBS2Q5VWX1 349 aaKnown RBP14.2□□□□□ -0.14
ATL3-203ENST00000538786 FAM71E1Q6IPT2 247 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 IKBIPQ70UQ0 350 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 GPR155Q7Z3F1 870 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 SPRED1Q7Z699 444 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 CBR4Q8N4T8 237 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 ANKRD53Q8N9V6 530 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 NCLNQ969V3 563 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 MTERF3Q96E29 417 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 PRAP1Q96NZ9 151 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 BDH2Q9BUT1 245 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 DCAF13Q9NV06 445 aaKnown RBP14.2□□□□□ -0.14
ATL3-203ENST00000538786 SH3BP4Q9P0V3 963 aa14.2□□□□□ -0.14
ATL3-203ENST00000538786 OAZ3Q9UMX2 235 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms