RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ALKBH8Q96BT7 664 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TM4SF19Q96DZ7 209 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZNF354BQ96LW1 612 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NDNQ99608 321 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ATG10Q9H0Y0 220 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TAS2R13Q9NYV9 303 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SEC14L3Q9UDX4 400 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SH2B3Q9UQQ2 575 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TRGV8A0A0C4DH27 118 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ARHGAP10A1A4S6 786 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC16A5O15375 505 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PGAM1P18669 254 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MST1P26927 711 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NAE1Q13564 534 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CAPN13Q6MZZ7 669 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 LCTLQ6UWM7 567 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MBOAT1Q6ZNC8 495 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ANKRD37Q7Z713 158 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PCGF5Q86SE9 256 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC26A11Q86WA9 606 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SHISA5Q8N114 240 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MYO1HQ8N1T3 1032 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 KCT2Q8NC54 265 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GRK7Q8WTQ7 553 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC13A3Q8WWT9 602 aa18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SUCOQ9UBS9 1254 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OR2W5A6NFC9 320 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PGRMC1O00264 195 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 LCMT2O60294 686 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HIST1H2AGP0C0S8 130 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC35G6P0C7Q6 338 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CDH1P12830 882 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HIST1H2ADP20671 130 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TIAL1Q01085 375 aaKnown RBP eCLIP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SRSF11Q05519 484 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RBPJQ06330 500 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CRYMQ14894 314 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZNF766Q5HY98 468 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ACER2Q5QJU3 275 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 H3F3CQ6NXT2 135 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PAQR3Q6TCH7 311 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HIST1H2AHQ96KK5 128 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HIST1H2AJQ99878 128 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 H2AFJQ9BTM1 129 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SGPP1Q9BX95 441 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 KCNK13Q9HB14 408 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NAALAD2Q9Y3Q0 740 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC22A7Q9Y694 548 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TACC2O95359 2948 aa18.56■□□□□ 0.56
TNFRSF1B-204ENST00000536782 POLQO75417 2590 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RDH16O75452 317 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NPPBP16860 134 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 IL10P22301 178 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TNFRSF8P28908 595 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 DHX9Q08211 1270 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ART3Q13508 389 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NAA30Q147X3 362 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 EXT1Q16394 746 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RNASEH2BQ5TBB1 312 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 FCRLBQ6BAA4 426 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PDSS2Q86YH6 399 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SRRM1Q8IYB3 904 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 BEST3Q8N1M1 668 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MFSD9Q8NBP5 474 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 M1APQ8TC57 530 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HAUS8Q9BT25 410 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PCDHGB6Q9Y5F9 930 aa18.55■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GOLGA6L10A0A0M3HER8 536 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PABPN1LA6NDY0 278 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CCL21O00585 134 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TTC4O95801 387 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PRF1P14222 555 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GABRB3P28472 473 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CA7P43166 264 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 FNTAP49354 379 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CDKN2DP55273 166 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PMP22Q01453 160 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ACTN3Q08043 901 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 HERC3Q15034 1050 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PPP1R7Q15435 360 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NSDHLQ15738 373 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PHKG1Q16816 387 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MEP1AQ16819 746 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SFT2D3Q587I9 215 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RBM20Q5T481 1227 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MTFR2Q6P444 385 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PLPP5Q8NEB5 264 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ITLN2Q8WWU7 325 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 LINGO1Q96FE5 620 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PEX11GQ96HA9 241 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CCDC120Q96HB5 630 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OR1F2PQ96R84 312 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RUBCNLQ9H714 662 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MMP25Q9NPA2 562 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 KLF2Q9Y5W3 355 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SCN3AQ9NY46 2000 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CSMD2Q7Z408 3487 aa18.54■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TTI1O43156 1089 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CDC123O75794 336 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms