RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PCDHGB7Q9Y5F8 929 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HS3ST3B1Q9Y662 390 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FLNCQ14315 2725 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FOXS1O43638 330 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 WISP3O95389 354 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 C2P06681 752 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ENO2P09104 434 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CCDC166P0CW27 439 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NPPBP16860 134 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KRT15P19012 456 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SLC26A3P40879 764 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CSRP3P50461 194 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 RPS15AP62244 130 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 RAPSNQ13702 412 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 VWA2Q5GFL6 755 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TIFABQ6ZNK6 161 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CROCCP2Q86T23 111 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 C17orf64Q86WR6 236 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ANKRD49Q8WVL7 239 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FBXL8Q96CD0 374 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZIM3Q96PE6 472 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 OR4K3Q96R72 315 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 DERL2Q9GZP9 239 aa16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZNF282Q9UDV7 671 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MRPS2Q9Y399 296 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FLNBO75369 2602 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KCNE1BA0A087WTH5 132 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CDC7O00311 574 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TXNDC9O14530 226 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 GUCA1CO95843 209 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 IGHEP01854 428 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 STATHP02808 62 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZGLP1P0C6A0 271 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CDH1P12830 882 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FBLP22087 321 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MAGEA12P43365 314 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 OCA2Q04671 838 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KLC1Q07866 573 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZNF844Q08AG5 666 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 DSG2Q14126 1118 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CSHL1Q14406 222 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CASP8Q14790 479 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KRT71Q3SY84 523 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NADK2Q4G0N4 442 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CAPN13Q6MZZ7 669 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KIRREL2Q6UWL6 708 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 LRIG3Q6UXM1 1119 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 GALNT16Q8N428 558 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 AMER3Q8N944 861 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CLEC1AQ8NC01 280 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 UBXN10Q96LJ8 280 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MESP1Q9BRJ9 268 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TRIM54Q9BYV2 358 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 DRC3Q9H069 523 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 VPS11Q9H270 941 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SEMA3GQ9NS98 782 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CDC14AQ9UNH5 594 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NOVA2Q9UNW9 492 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZNF451Q9Y4E5 1061 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 COL12A1Q99715 3063 aa16.97■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FEZF1A0PJY2 475 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PABPN1LA6NDY0 278 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FFAR3O14843 346 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 GPR42O15529 346 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 LCMT2O60294 686 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SOX8P57073 446 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ATP6V0D1P61421 351 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 KCNC4Q03721 635 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FAM53BQ14153 422 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MYBPC3Q14896 1274 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CEP85LQ5SZL2 805 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 LAPTM4BQ86VI4 370 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MIEF2Q96C03 454 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MMABQ96EY8 250 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HAUS8Q9BT25 410 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CRB3Q9BUF7 120 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZNF552Q9H707 407 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FBXL4Q9UKA2 621 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 G3BP2Q9UN86 482 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
TNFRSF1A-209ENST00000536717 A0A0A6YYC8 382 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NPEPPSL1A6NEC2 478 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 I3L1I5 382 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ALOX12BO75342 701 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 BCL6P41182 706 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MLLT10P55197 1068 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ESPL1Q14674 2120 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IGFBP7Q16270 282 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 FAM83EQ2M2I3 478 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ABHD11Q8NFV4 315 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ACMSDQ8TDX5 336 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MZB1Q8WU39 189 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ATL1Q8WXF7 558 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TM4SF19Q96DZ7 209 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 THAP11Q96EK4 314 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms