RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PLEKHS1Q5SXH7 462 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 UBE2R2Q712K3 238 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ZSWIM9Q86XI8 627 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
RAB40C-203ENST00000535977 TMEM132CQ8N3T6 1108 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ELMO1Q92556 727 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 CMTM7Q96FZ5 175 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 DCSTAMPQ9H295 470 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 NARFLQ9H6Q4 476 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 TOR4AQ9NXH8 423 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 USE1Q9NZ43 259 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 PCDHGA10Q9Y5H3 936 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 A0A1W2PQ72 361 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 METTL15A6NJ78 407 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 CXCR6O00574 342 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 FKTNO75072 461 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 SEMA3DO95025 777 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 APOA1P02647 267 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 NAT2P11245 290 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ENPP1P22413 925 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 S100A3P33764 101 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 LBX1P52954 281 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 PTSQ03393 145 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 KRR1Q13601 381 aaKnown RBP17.35■□□□□ 0.37
RAB40C-203ENST00000535977 BOP1Q14137 746 aaKnown RBP17.35■□□□□ 0.37
RAB40C-203ENST00000535977 SGO1Q5FBB7 561 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 GPR149Q86SP6 731 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ADHFE1Q8IWW8 467 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ADGRG2Q8IZP9 1017 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 L3MBTL4Q8NA19 623 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 PIK3R3Q92569 461 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 FAM162AQ96A26 154 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 TESCQ96BS2 214 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 SLC47A1Q96FL8 570 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 RNF170Q96K19 258 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 LMLNQ96KR4 655 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 ELOVL6Q9H5J4 265 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 SLC25A13Q9UJS0 675 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 TRBV5-3A0A0A0MS03 114 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 GRM6O15303 877 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CCR7P32248 378 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 PPM1AP35813 382 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ETV3P41162 512 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 NRIP1P48552 1158 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 AP1S2P56377 157 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 C22orf39Q6P5X5 142 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 SUSD1Q6UWL2 747 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF557Q8N988 423 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 SELENOMQ8WWX9 145 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ASB11Q8WXH4 323 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 KAT8Q9H7Z6 458 aaKnown RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 OBSL1O75147 1896 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 EFCAB9A8MZ26 197 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 RECQL5O94762 991 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CST1P01037 141 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 LRG1P02750 347 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 NAGAP17050 411 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 MASP1P48740 699 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ST13P50502 369 aaKnown RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CYP4F8P98187 520 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ATP13A5Q4VNC0 1218 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CARD16Q5EG05 197 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 TPRG1LQ5T0D9 272 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 SYT6Q5T7P8 510 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CES5AQ6NT32 575 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CALHM3Q86XJ0 350 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 RBM4BQ9BQ04 359 aaKnown RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 RBM4Q9BWF3 364 aaKnown RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ACPTQ9BZG2 426 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ZBTB20Q9HC78 741 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 DCAF13Q9NV06 445 aaKnown RBP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 SLC25A37Q9NYZ2 338 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 TSPAN9O75954 239 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 PDYNP01213 254 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CTRB1P17538 263 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CYP2A7P20853 494 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 DEFA1P59665 94 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 DEFA3P59666 94 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CPSF6Q16630 551 aaKnown RBP eCLIP17.34■□□□□ 0.37
RAB40C-203ENST00000535977 AAK1Q2M2I8 961 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 TBRG1Q3YBR2 411 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CTRB2Q6GPI1 263 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CCDC149Q6ZUS6 474 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 MSRB3Q8IXL7 192 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 PLPP6Q8IY26 295 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 ACOXLQ9NUZ1 547 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 CLEC4EQ9ULY5 219 aa17.34■□□□□ 0.37
RAB40C-203ENST00000535977 LOC100130705A0A1B0GUX0 176 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 A8MX80 341 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 CCDC159P0C7I6 412 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 NUDT1P36639 197 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 SPINT3P49223 89 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 PLIN5Q00G26 463 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 CDK5R2Q13319 367 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 PLA2G4EQ3MJ16 856 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 TTC16Q8NEE8 873 aa17.33■□□□□ 0.36
RAB40C-203ENST00000535977 OMA1Q96E52 524 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms