RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ABCG2Q9UNQ0 655 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 PCDHGB6Q9Y5F9 930 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 TEX51A0A1B0GUA7 166 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 FAM95CA0A1B0GW59 222 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF780AO75290 641 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SEC14L2O76054 403 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GLUD1P00367 558 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 MYL9P24844 172 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 YBEYP58557 167 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF177Q13360 481 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 KCNC3Q14003 757 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SELPLGQ14242 412 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 C10orf62Q5T681 223 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PARP16Q8N5Y8 322 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 TXNDC5Q8NBS9 432 aaKnown RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 LKAAEAR1Q8TD35 194 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PIH1D2Q8WWB5 315 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 IL1RAPQ9NPH3 570 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 IFT46Q9NQC8 304 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PCDHB16Q9NRJ7 776 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 NSMCE4AQ9NXX6 385 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 MID2Q9UJV3 735 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 RAP2CQ9Y3L5 183 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 TRAV19A0A0A6YYK7 116 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 NEDD8-MDP1E9PL57 170 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 UBFD1O14562 309 aaKnown RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 TOR1AO14656 332 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 BNIP3LO60238 219 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 POU3F3P20264 500 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ACVR1Q04771 509 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 NFE2L1Q14494 772 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF235Q14590 738 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 DUSP7Q16829 419 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 FAM83EQ2M2I3 478 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GPAT3Q53EU6 434 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PYDC2Q56P42 97 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 C6orf141Q5SZD1 244 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GRTP1Q5TC63 336 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SLX4IPQ5VYV7 408 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 CRTC1Q6UUV9 634 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 FAM131AQ6UXB0 335 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 CYHR1Q6ZMK1 362 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 MFSD4AQ8N468 514 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ANKFN1Q8N957 763 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SLC25A23Q9BV35 468 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GIMAP2Q9UG22 337 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PRKAG2Q9UGJ0 569 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PCDHB9Q9Y5E1 797 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PRSS44E7EML9 344 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 DLX3O60479 287 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ERN1O75460 977 aaKnown RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 LRG1P02750 347 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 CTSLP07711 333 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 HLA-DPA1P20036 260 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SPRP35270 261 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 AP2S1P53680 142 aaPredicted RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 EPHA5P54756 1037 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 CDH13P55290 713 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 VEPH1Q14D04 833 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 NDUFAF5Q5TEU4 345 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 KIF18BQ86Y91 864 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 EPHX4Q8IUS5 362 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ADGRG2Q8IZP9 1017 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 CACTIN-AS1Q8N1I8 211 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 STON2Q8WXE9 905 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ST8SIA4Q92187 359 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 SLCO4A1Q96BD0 722 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 GIMAP5Q96F15 307 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF285Q96NJ3 590 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 RPP25Q9BUL9 199 aaKnown RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 ZBTB26Q9HCK0 441 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 FBRSL1Q9HCM7 1045 aaKnown RBP8.74□□□□□ -1.01
SF3B2-216ENST00000534765 LIMD1Q9UGP4 676 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 RNF112Q9ULX5 631 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 TPRKBQ9Y3C4 175 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 PRSS21Q9Y6M0 314 aa8.74□□□□□ -1.01
SF3B2-216ENST00000534765 A0A0B4J203 849 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 ACOX3O15254 700 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 APOC3P02656 99 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 LCKP06239 509 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 LHCGRP22888 699 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 C2orf80Q0P641 193 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.011e-8■□□□□ 9.6
SF3B2-216ENST00000534765 C18orf21Q32NC0 220 aaPredicted RBP8.73□□□□□ -1.01
SF3B2-216ENST00000534765 Q5BKY6 102 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 CTSL3PQ5NE16 218 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 LY6G5CQ5SRR4 150 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 ARMC12Q5T9G4 340 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
SF3B2-216ENST00000534765 KIAA0930Q6ICG6 404 aaPredicted RBP8.73□□□□□ -1.01
SF3B2-216ENST00000534765 FIP1L1Q6UN15 594 aaKnown RBP8.73□□□□□ -1.01
SF3B2-216ENST00000534765 EFHBQ8N7U6 833 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 C19orf18Q8NEA5 215 aa8.73□□□□□ -1.01
SF3B2-216ENST00000534765 NXPE3Q969Y0 559 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 271.3 ms