RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 NAGLUP54802 743 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 PKNOX1P55347 436 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 STXBP1P61764 594 aaKnown RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 CLCQ05315 142 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 PCLAFQ15004 111 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 HSP90B2PQ58FF3 399 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 TTC19Q6DKK2 380 aaPredicted RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 RHBDD2Q6NTF9 364 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 GPRIN3Q6ZVF9 776 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 MILR1Q7Z6M3 343 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 C10orf107Q8IVU9 208 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 NLGN4XQ8N0W4 816 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 IL22RA1Q8N6P7 574 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 ZNF740Q8NDX6 193 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 NLGN4YQ8NFZ3 816 aaPredicted RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 MDM1Q8TC05 714 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 CCT6BQ92526 530 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 KIAA1143Q96AT1 154 aaPredicted RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 MVB12AQ96EY5 273 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 CENPKQ9BS16 269 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 NTMT1Q9BV86 223 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 ENAMQ9NRM1 1142 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 CUTCQ9NTM9 273 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 NDOR1Q9UHB4 597 aa11.3□□□□□ -0.6
PPFIA1-220ENST00000532024 SPEGQ15772 3267 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 HEATR5BQ9P2D3 2071 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 A0A088AWK7 358 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 TMEM120BA0PK00 339 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 C9J4A7 227 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 AGPSO00116 658 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 DSCR3O14972 297 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 BIRC5O15392 142 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 HCRTR1O43613 425 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 RAD1O60671 282 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 CRCPO75575 148 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 CLEC3AO75596 197 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 TIAF1O95411 115 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 DLGAP3O95886 979 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 NTRK1P04629 796 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 CD63P08962 238 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 PCNAP12004 261 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 CREB1P16220 341 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 EPORP19235 508 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ZNF10P21506 573 aaPredicted RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ALAS2P22557 587 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SERPINB5P36952 375 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 AVPR1BP47901 424 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SERPINB4P48594 390 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SLC18A1P54219 525 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 TGM3Q08188 693 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ABHD18Q0P651 414 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 IFT88Q13099 833 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 E2F2Q14209 437 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 PRTGQ2VWP7 1150 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 GGTA1PQ4G0N0 100 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 UNC50Q53HI1 259 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 FRMD7Q6ZUT3 714 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ABHD13Q7L211 337 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 VN1R4Q7Z5H5 301 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■■■■■ 57.1
PPFIA1-220ENST00000532024 CACNA2D3Q8IZS8 1091 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ANKRD42Q8N9B4 389 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 L3MBTL4Q8NA19 623 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 GALNT6Q8NCL4 622 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 TRPC4APQ8TEL6 797 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 NSUN5Q96P11 429 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SH3GL2Q99962 352 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 EFHD1Q9BUP0 239 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 DPH1Q9BZG8 443 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 PADI1Q9ULC6 663 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 SNX6Q9UNH7 406 aa11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-220ENST00000532024 H0YIV9 168 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 H3BMH7 237 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 MEN1O00255 615 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 OR7A17O14581 309 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 KRT6AP02538 564 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 KRT6BP04259 564 aa11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-220ENST00000532024 BPGMP07738 259 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms