RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SLC52A3Q9NQ40 469 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 GPR173Q9NS66 373 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 INTS9Q9NV88 658 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 NOCTQ9UK39 431 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 MAN1B1Q9UKM7 699 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 FBXW2Q9UKT8 454 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 KIAA1210Q9ULL0 1709 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 ISY1Q9ULR0 285 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 AGTPBP1Q9UPW5 1226 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PFASO15067 1338 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 H0YIG0 161 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SERPINB2P05120 415 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 EDN1P05305 212 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 THEGLP0DJG4 465 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 DARSP14868 501 aaKnown RBP4.07□□□□□ -1.76
C11orf88-204ENST00000529661 LHCGRP22888 699 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ITGA3P26006 1051 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 MAGEB1P43366 347 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 UCP2P55851 309 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ARF5P84085 180 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 AKAP17AQ02040 695 aaKnown RBP4.07□□□□□ -1.76
C11orf88-204ENST00000529661 WASHC5Q12768 1159 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 GPR17Q13304 367 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SQLEQ14534 574 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 CCDC6Q16204 474 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SLC25A53Q5H9E4 307 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 KCTD11Q693B1 232 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 TTC27Q6P3X3 843 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ZNF843Q8N446 348 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SFRP1Q8N474 314 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 MARVELD2Q8N4S9 558 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 KIAA0895Q8NCT3 520 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ZNF248Q8NDW4 579 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 TRIM58Q8NG06 486 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 OR7A2PQ8NGA2 310 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 OR13C3Q8NGS6 347 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SAP25Q8TEE9 199 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 PIK3R3Q92569 461 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 C5orf30Q96GV9 206 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SENP5Q96HI0 755 aaPredicted RBP4.07□□□□□ -1.76
C11orf88-204ENST00000529661 C4orf45Q96LM5 186 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ZNF559Q9BR84 538 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 IDI2Q9BXS1 227 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 BARHL1Q9BZE3 327 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ACPTQ9BZG2 426 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 AKIRIN1Q9H9L7 192 aaPredicted RBP4.07□□□□□ -1.76
C11orf88-204ENST00000529661 RNPEPL1Q9HAU8 725 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 RAB9BQ9NP90 201 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 GMEB2Q9UKD1 530 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 GRID1Q9ULK0 1009 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 R4GN57 208 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 WDR81Q562E7 1941 aa4.07□□□□□ -1.76
C11orf88-204ENST00000529661 SPAG9O60271 1321 aaKnown RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 A0A087X0K7 114 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 A0A0G2JLW4 131 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 FAM149AA5PLN7 773 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ANTXRLA6NF34 631 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ANKDD1BA6NHY2 528 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 MSGN1A6NI15 193 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ZNF197O14709 1029 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 SCO2O43819 266 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 VEGFDO43915 354 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ACSL4O60488 711 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 KRT33AO76009 404 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 NADKO95544 446 aaPredicted RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 NGFP01138 241 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 GPIP06744 558 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 FAM200BP0CF97 657 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 CHRNB4P30926 498 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 YBEYP58557 167 aaPredicted RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ERVK11-1P61568 191 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 SLC34A1Q06495 639 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 EXT1Q16394 746 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 PKN2Q16513 984 aaKnown RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 KIAA1644Q3SXP7 199 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 LCN1P1Q5VSP4 162 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 AGAP6Q5VW22 663 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ARHGAP17Q68EM7 881 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 PM20D1Q6GTS8 502 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 SLC16A9Q7RTY1 509 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 KIRREL3Q8IZU9 778 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 KLHDC1Q8N7A1 406 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 PSMA8Q8TAA3 256 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 METTL21AQ8WXB1 218 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 CCDC47Q96A33 483 aaKnown RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 RBM41Q96IZ5 413 aaKnown RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 EPSTI1Q96J88 318 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 LITAFQ99732 161 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 ALKBH7Q9BT30 221 aaPredicted RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 FAM49AQ9H0Q0 323 aaPredicted RBP4.06□□□□□ -1.76
C11orf88-204ENST00000529661 P2RY12Q9H244 342 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 MAGEF1Q9HAY2 307 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 SIX2Q9NPC8 291 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 DNAJC11Q9NVH1 559 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 MIS18AQ9NYP9 233 aa4.06□□□□□ -1.76
C11orf88-204ENST00000529661 MAD2L2Q9UI95 211 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms