RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CD59P13987 128 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FBLP22087 321 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FCARP24071 287 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ITGA3P26006 1051 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PTPN4P29074 926 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C21orf33P30042 268 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 HLA-FP30511 346 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TMPOP42166 694 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ARHGAP25P42331 645 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TNFRSF4P43489 277 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 NUMBP49757 651 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CLCN4P51793 760 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PDX1P52945 283 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PROK1P58294 105 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 BRWD1-AS2P59051 145 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ISL1P61371 349 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 UBE2HP62256 183 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 RPS18P62269 152 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CCNA1P78396 465 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 HSF2Q03933 536 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SRSF1Q07955 248 aaKnown RBP eCLIP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FUT7Q11130 342 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF155Q12901 538 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 GPS2Q13227 327 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 DMP1Q13316 513 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SNX1Q13596 522 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CDH18Q13634 790 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 DHX34Q14147 1143 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PTGR1Q14914 329 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 KIR2DS5Q14953 304 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 KRT31Q15323 416 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM41BQ5BJD5 291 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ARMCX4Q5H9R4 360 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CFAP157Q5JU67 520 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C9orf50Q5SZB4 431 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C20orf194Q5TEA3 1177 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TTC27Q6P3X3 843 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FAM122CQ6P4D5 195 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PACS1Q6VY07 963 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZYG11AQ6WRX3 759 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF788Q6ZQV5 615 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF679Q8IYX0 411 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 PRSS35Q8N3Z0 413 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FADS6Q8N9I5 356 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 FAM98AQ8NCA5 519 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 STEAP2Q8NFT2 490 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 OR56B2PQ8NGI1 322 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 OR52K2Q8NGK3 314 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 OR10Q1Q8NGQ4 319 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SPATA22Q8NHS9 363 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 DPF1Q92782 380 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TANKQ92844 425 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TSACCQ96A04 125 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 COQ8BQ96D53 544 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C3orf30Q96M34 536 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF583Q96ND8 569 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TTC25Q96NG3 672 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MAP3K3Q99759 626 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CCDC3Q9BQI4 270 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SEMA4CQ9C0C4 833 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C5orf66Q9H5L9 145 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 DCLRE1BQ9H816 532 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 LRRC40Q9H9A6 602 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TRPC7Q9HCX4 862 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ACOXLQ9NUZ1 547 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 GTSE1Q9NYZ3 720 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 VPS54Q9P1Q0 977 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C11orf21Q9P2W6 132 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 COPS7AQ9UBW8 275 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MRPS7Q9Y2R9 242 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CUX2O14529 1486 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 NSD2O96028 1365 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ABCC4O15439 1325 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 A0A1B0GUL7 405 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 EEF2KO00418 725 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 KLHL41O60662 606 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 TBX19O60806 448 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CSO75390 466 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CSDE1O75534 798 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 GRAP2O75791 330 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SERPINI2O75830 405 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PIGNO95427 931 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 EPOP01588 193 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PROS1P07225 676 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CLUP10909 449 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CETPP11597 493 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 DRD5P21918 477 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ALDH1B1P30837 517 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SRD5A2P31213 254 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 STIP1P31948 543 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SFTPDP35247 375 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 TNFSF10P50591 281 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CCL11P51671 97 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 THOP1P52888 689 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PGGT1BP53609 377 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 MLLT10P55197 1068 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 C21orf58P58505 322 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 RPP38P78345 283 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ZXDBP98169 803 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 BEX3Q00994 111 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms