RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RGNQ15493 299 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 CAPN13Q6MZZ7 669 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 ARMCX6Q7L4S7 300 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 LRRC56Q8IYG6 542 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 MAL2Q969L2 176 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 ZNF707Q96C28 371 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 THAP11Q96EK4 314 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 C7orf34Q96L11 122 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 SPATA9Q9BWV2 254 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 SGPP1Q9BX95 441 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 RIBC2Q9H4K1 309 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PLGRKTQ9HBL7 147 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PREBQ9HCU5 417 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 GPATCH2Q9NW75 528 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 SIRT5Q9NXA8 310 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 AASSQ9UDR5 926 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 M0QX08 132 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 PLK4O00444 970 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 UGT2B11O75310 529 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 KLHL18O94889 574 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 HLA-EP13747 358 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 EPHA2P29317 976 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 HPCAL1P37235 193 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 GJA8P48165 433 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 ITGA1P56199 1179 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 KCNJ10P78508 379 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 IL5RAQ01344 420 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 BNIP3Q12983 259 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SIM2Q14190 667 aaPredicted RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 ZNF547Q8IVP9 402 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SYTL1Q8IYJ3 562 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 WFIKKN2Q8TEU8 576 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 NRBF2Q96F24 287 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 MAGED4Q96JG8 741 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 NODALQ96S42 347 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 MYOCQ99972 504 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 GPN2Q9H9Y4 310 aaPredicted RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 ATP6V1HQ9UI12 483 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 VPS4AQ9UN37 437 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SLC27A6Q9Y2P4 619 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 KIF26AQ9ULI4 1882 aaPredicted RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 GNG14A0A1W2PPG7 69 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 MGAT4DA6NG13 374 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 PTGES3LE9PB15 166 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 AXIN1O15169 862 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 HOXC11O43248 304 aaPredicted RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 XYLBO75191 536 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 HNRNPA1P09651 372 aaKnown RBP eCLIP16.91■□□□□ 0.3
USH1C-205ENST00000527020 MVDP53602 400 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 KEAP1Q14145 624 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SLBPQ14493 270 aaKnown RBP eCLIP16.91■□□□□ 0.3
USH1C-205ENST00000527020 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.91■□□□□ 0.3
USH1C-205ENST00000527020 ANXA8L1Q5VT79 327 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 ZNF852Q6ZMS4 543 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SLC16A12Q6ZSM3 486 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 B3GNT8Q7Z7M8 397 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 TRAPPC5Q8IUR0 188 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 LAS2Q8IYD9 372 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 NAGSQ8N159 534 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 RAB2BQ8WUD1 216 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 SAMHD1Q9Y3Z3 626 aaKnown RBP16.91■□□□□ 0.3
USH1C-205ENST00000527020 PLXND1Q9Y4D7 1925 aa16.91■□□□□ 0.3
USH1C-205ENST00000527020 RNASET2O00584 256 aaKnown RBP16.9■□□□□ 0.3
USH1C-205ENST00000527020 NOL3O60936 208 aaKnown RBP16.9■□□□□ 0.3
USH1C-205ENST00000527020 INMTO95050 263 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 FKBP9O95302 570 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 FGBP02675 491 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 NTRK1P04629 796 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 ABCB1P08183 1280 aaPredicted RBP16.9■□□□□ 0.3
USH1C-205ENST00000527020 ITIH1P19827 911 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 ITGB7P26010 798 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 GP2P55259 537 aaKnown RBP16.9■□□□□ 0.3
USH1C-205ENST00000527020 ST8SIA6P61647 398 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 C9orf64Q5T6V5 341 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 TSEN54Q7Z6J9 526 aaKnown RBP16.9■□□□□ 0.3
USH1C-205ENST00000527020 HORMAD1Q86X24 394 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 OR4A15Q8NGL6 344 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 NUS1Q96E22 293 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 HSPBAP1Q96EW2 488 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 TPD52L3Q96J77 140 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 RAD9AQ99638 391 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 FUNDC2Q9BWH2 189 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 SH3BP4Q9P0V3 963 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 MAPRE3Q9UPY8 281 aa16.9■□□□□ 0.3
USH1C-205ENST00000527020 FOXE1O00358 373 aaPredicted RBP16.89■□□□□ 0.3
USH1C-205ENST00000527020 JRKO75564 520 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 PAPLNO95428 1278 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 ANGPTL1O95841 491 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 GBAP04062 536 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 PRNPP04156 253 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 C1GALT1C1LP0DN25 315 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 HTR1BP28222 390 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 FMO3P31513 532 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 PCGF2P35227 344 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 SLC6A11P48066 632 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms