RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ACAD11Q709F0 780 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 TRIM46Q7Z4K8 759 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 VN1R5Q7Z5H4 357 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 ASPGQ86U10 573 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 TRPV3Q8NET8 790 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 KLHL6Q8WZ60 621 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 N4BP2L2Q92802 583 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 OR2A5Q96R48 311 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 ACPTQ9BZG2 426 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 CHRNA10Q9GZZ6 450 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 BRF2Q9HAW0 419 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 FAM60AQ9NP50 221 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 PSD3Q9NYI0 1048 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 PDP2Q9P2J9 529 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 SLC12A4Q9UP95 1085 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 PCDHGA1Q9Y5H4 931 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 AP1M2Q9Y6Q5 423 aa15.15■□□□□ 0.02
TSPAN4-213ENST00000524895 RP1P56715 2156 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 GOLGA8QA0A0J9YX86 632 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 ATP6AP2A0A1C7CYW4 349 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SERTM1A2A2V5 107 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 GOLGA8OA6NCC3 632 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 GOLGA8NF8WBI6 632 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SDHDO14521 159 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 NDUFAB1O14561 156 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SNX3O60493 162 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 VPS4BO75351 444 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 CLEC3AO75596 197 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 ATP6AP2O75787 350 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 STATHP02808 62 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SLC35G6P0C7Q6 338 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 EPHA3P29320 983 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 IDH3AP50213 366 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 HMGCS1Q01581 520 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 NR6A1Q15406 480 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 GKAP1Q5VSY0 366 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 NXNQ6DKJ4 435 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 FRMPD2BQ6IN97 320 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 VN1R4Q7Z5H5 301 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SLITRK4Q8IW52 837 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 DNAJC22Q8N4W6 341 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 ZNF655Q8N720 491 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 RCBTB1Q8NDN9 531 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 OR2T11Q8NH01 316 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 BCAS4Q8TDM0 211 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SLC13A3Q8WWT9 602 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 TUBGCP3Q96CW5 907 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 CMTM7Q96FZ5 175 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SLC41A2Q96JW4 573 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 C3orf30Q96M34 536 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 SERPINI1Q99574 410 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 WDR55Q9H6Y2 383 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 KCNK13Q9HB14 408 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 NMRK1Q9NWW6 199 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 PLCL2Q9UPR0 1127 aa15.14■□□□□ 0.01
TSPAN4-213ENST00000524895 H0YGG7 62 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 SH3BGRLO75368 114 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 RSL1D1O76021 490 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 TGFB1P01137 390 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 EIF2S1P05198 315 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 CSRP1P21291 193 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 PTX3P26022 381 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 VSX2P58304 361 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 ARF3P61204 181 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 RGS1Q08116 209 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 TRA2AQ13595 282 aaKnown RBP eCLIP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 KCNAB1Q14722 419 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 ATP6AP1LQ52LC2 224 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 SPDYAQ5MJ70 313 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 ARHGAP22Q7Z5H3 698 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 MCATQ8IVS2 390 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 CSNK1A1LQ8N752 337 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 CAMKVQ8NCB2 501 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 CREB3L4Q8TEY5 395 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 C10orf82Q8WW14 230 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 RILPQ96NA2 401 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 TMEM74Q96NL1 305 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 CENPKQ9BS16 269 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 MS4A8Q9BY19 250 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 NLNQ9BYT8 704 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 SYNPO2LQ9H987 977 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 FANCEQ9HB96 536 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 TCF7L2Q9NQB0 619 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 IRAK4Q9NWZ3 460 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 TOR4AQ9NXH8 423 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 PPT2Q9UMR5 302 aa15.13■□□□□ 0.01
TSPAN4-213ENST00000524895 ASXL3Q9C0F0 2248 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 HEATR5BQ9P2D3 2071 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 LOC105369274A0A096LPK9 316 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 LOC102723532A0A0G2JNH3 316 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 SRPX2O60687 465 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 ETHE1O95571 254 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 SERPINA6P08185 405 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 CDK4P11802 303 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms