RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 RAB43Q86YS6 212 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 MREGQ8N565 214 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SNX31Q8N9S9 440 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 OR2Y1Q8NGV0 311 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 NT5CQ8TCD5 201 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SLC13A3Q8WWT9 602 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 TTC9Q92623 222 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 UBE2E3Q969T4 207 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 NACC2Q96BF6 587 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 PTCD3Q96EY7 689 aaKnown RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SCYL1Q96KG9 808 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 IP6K3Q96PC2 410 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 RUFY1Q96T51 708 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 MRPL46Q9H2W6 279 aaKnown RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 LAMA5O15230 3695 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 IGLV3-12A0A075B6K2 115 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 STX16-NPEPL1H3BU86 382 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 STX16O14662 325 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 NDUFS4O43181 175 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 KLF7O75840 302 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 MED26O95402 600 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 NSA2O95478 260 aaKnown RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 EPB42P16452 691 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 FBLP22087 321 aaKnown RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 CASP2P42575 452 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 RPS18P62269 152 aaKnown RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 MEF2AQ02078 507 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 ERV3-1Q14264 604 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 SLBPQ14493 270 aaKnown RBP eCLIP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 SSPNQ14714 243 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 PFKFB4Q16877 469 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 BORAQ6PGQ7 559 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 TMIGD1Q6UXZ0 262 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 COX15Q7KZN9 410 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 ADAMTS17Q8TE56 1095 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 MZB1Q8WU39 189 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 COL26A1Q96A83 441 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 PARD6BQ9BYG5 372 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 SPNS1Q9H2V7 528 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 ANKHQ9HCJ1 492 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 GEMIN8Q9NWZ8 242 aaKnown RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 ZNF282Q9UDV7 671 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■□□ 14.8
VEGFA-225ENST00000523950 DCDC2Q9UHG0 476 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 ANGPTL3Q9Y5C1 460 aa11.94□□□□□ -0.5
VEGFA-225ENST00000523950 V9GYY5 206 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-225ENST00000523950 CDC14CA4D256 554 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 VSTM2BA6NLU5 285 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 TK2O00142 265 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 PCDH17O14917 1159 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ATXN7O15265 892 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 FOXS1O43638 330 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 UGDHO60701 494 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 GLRA3O75311 464 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 IGHEP01854 428 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SERPINA6P08185 405 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SFTPCP11686 197 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 EPORP19235 508 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 TAC1P20366 129 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SERPINB1P30740 379 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 CCR10P46092 362 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 OR1D4P47884 311 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 CYP4F2P78329 520 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 IRF8Q02556 426 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 OCA2Q04671 838 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 HERC3Q15034 1050 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 RBBP5Q15291 538 aaKnown RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 NKG7Q16617 165 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 TBR1Q16650 682 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 HIST2H2ACQ16777 129 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 FBXO48Q5FWF7 155 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 XKR6Q5GH73 641 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 HIST2H2AA3Q6FI13 130 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ABHD13Q7L211 337 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ZNF740Q8NDX6 193 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ESAMQ96AP7 390 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 VPS50Q96JG6 964 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SPSB2Q99619 263 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ROPN1BQ9BZX4 212 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 TGIF2Q9GZN2 237 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ROPN1Q9HAT0 212 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 MKKSQ9NPJ1 570 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 C14orf105Q9NVL8 296 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 ZNF358Q9NW07 568 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 FAM53CQ9NYF3 392 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 TBK1Q9UHD2 729 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 PTRH2Q9Y3E5 179 aaKnown RBP11.93□□□□□ -0.5
VEGFA-225ENST00000523950 MAP4K5Q9Y4K4 846 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 NUP210LQ5VU65 1888 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms