RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SAP18O00422 153 aaKnown RBP12.8□□□□□ -0.36
CLK4-210ENST00000522136 GP1BAP07359 652 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 RPS15AP62244 130 aaKnown RBP12.8□□□□□ -0.36
CLK4-210ENST00000522136 TUBB3Q13509 450 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 NR6A1Q15406 480 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 IMPG1Q17R60 797 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 LSM12Q3MHD2 195 aaKnown RBP12.8□□□□□ -0.36
CLK4-210ENST00000522136 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
CLK4-210ENST00000522136 TMEM198Q66K66 360 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 RNF44Q7L0R7 432 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 DNAJC22Q8N4W6 341 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 DEFB124Q8NES8 71 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 SEC16BQ96JE7 1060 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
CLK4-210ENST00000522136 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
CLK4-210ENST00000522136 PTPRZ1P23471 2315 aaPredicted RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 SCN3AQ9NY46 2000 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 E9PBE3 544 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 H0YGG7 62 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 SLC28A1O00337 649 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 FOXE1O00358 373 aaPredicted RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 KLHL41O60662 606 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 ZBTB11O95625 1053 aaPredicted RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 EIF2S1P05198 315 aaKnown RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 AHRP35869 848 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 PIK3CBP42338 1070 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 CLDN6P56747 220 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 SPIDRQ14159 915 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 NAA25Q14CX7 972 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 LARP4Q71RC2 724 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK4-210ENST00000522136 PRSS42Q7Z5A4 293 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 B3GNT8Q7Z7M8 397 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
CLK4-210ENST00000522136 TBC1D19Q8N5T2 526 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 MARK4Q96L34 752 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 F2RL3Q96RI0 385 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 SIKE1Q9BRV8 207 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 KLHL31Q9H511 634 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 TCF7L2Q9NQB0 619 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 STARD5Q9NSY2 213 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 SEMA5BQ9P283 1151 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 PDP2Q9P2J9 529 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
CLK4-210ENST00000522136 SERTM1A2A2V5 107 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 D6RAR5 112 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 P2RX6O15547 441 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 NDUFS4O43181 175 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 RGS14O43566 566 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 HNRNPH1P31943 449 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 GABRA4P48169 554 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 RELAQ04206 551 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 HYAL2Q12891 473 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 CSTF3Q12996 717 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 TRIP6Q15654 476 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 AP5B1Q2VPB7 878 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 PHF19Q5T6S3 580 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 RNF165Q6ZSG1 346 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ACAD11Q709F0 780 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 SLC13A3Q8WWT9 602 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 KLHL6Q8WZ60 621 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 APIPQ96GX9 242 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 SLC41A2Q96JW4 573 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 MS4A8Q9BY19 250 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 BRF2Q9HAW0 419 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 PDE7BQ9NP56 450 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 TOR4AQ9NXH8 423 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 VPS29Q9UBQ0 182 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 GVINP1Q7Z2Y8 2422 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 COL27A1Q8IZC6 1860 aaPredicted RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 ADAMTS20P59510 1910 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 CLEC3AO75596 197 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 THRAP10827 490 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 FOLR1P15328 257 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ARL4DP49703 201 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 PHEXP78562 749 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 HSD11B2P80365 405 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ZNF33BQ06732 778 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 HKDC1Q2TB90 917 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
CLK4-210ENST00000522136 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ARHGAP22Q7Z5H3 698 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 ASPGQ86U10 573 aa12.78□□□□□ -0.36
CLK4-210ENST00000522136 SLITRK4Q8IW52 837 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms