RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 COL19A1Q14993 1142 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 SLC37A3Q8NCC5 494 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 CPT1CQ8TCG5 803 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 CD300LFQ8TDQ1 290 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 WFIKKN2Q8TEU8 576 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 XAGE5Q8WWM1 108 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 TTYH2Q9BSA4 534 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 SLC5A7Q9GZV3 580 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 C1orf109Q9NX04 203 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 POMPQ9Y244 141 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 HIF3AQ9Y2N7 669 aa11.78□□□□□ -0.52
ERGIC1-208ENST00000520399 NRP1O14786 923 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 CA12O43570 354 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 HSD11B1P28845 292 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 MAP3K8P41279 467 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 FSTL1Q12841 308 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 TRMT10BQ6PF06 316 aaKnown RBP11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 POLR2CP19387 275 aaPredicted RBP11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 ACVR2AP27037 513 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 HERVK_113P63132 956 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 AIMP2Q13155 320 aaKnown RBP11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 IDNKQ5T6J7 187 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 OR52E8Q6IFG1 317 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 CRYBG2Q8N1P7 616 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 CBR4Q8N4T8 237 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 DNAJB8Q8NHS0 232 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 HYLS1Q96M11 299 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 NEDD4LQ96PU5 975 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 ERVK-6Q9BXR3 956 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 BCAS3Q9H6U6 928 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 FNIP2Q9P278 1114 aa11.77□□□□□ -0.52
ERGIC1-208ENST00000520399 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 CXCR6O00574 342 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ENPP3O14638 875 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ITGA10O75578 1167 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 IMPDH1P20839 514 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 CLCN7P51798 805 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 BDH1Q02338 343 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 KCNJ11Q14654 390 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 TMEM44Q2T9K0 475 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 EIPR1Q53HC9 387 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 COMTD1Q86VU5 262 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 DCBLD1Q8N8Z6 715 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 DNAAF1Q8NEP3 725 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 RHBDF1Q96CC6 855 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 NECAB3Q96P71 396 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 COQ10BQ9H8M1 238 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 SERINC1Q9NRX5 453 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF69Q9UC07 566 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 TCRBV7S3A2A0A539 114 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 TNFRSF10BO14763 440 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 DNAJB5O75953 348 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ANGPTL1O95841 491 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 CSTBP04080 98 aaKnown RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 GLP1RP43220 463 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 HTRA4P83105 476 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 RPL6Q02878 288 aaKnown RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 UBE2UQ5VVX9 321 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 PAMR1Q6UXH9 720 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 GLB1L3Q8NCI6 653 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 C10orf82Q8WW14 230 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 NUS1Q96E22 293 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 FBXL18Q96ME1 805 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 MALT1Q9UDY8 824 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 FBXW2Q9UKT8 454 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 POLHQ9Y253 713 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 LRRC72A6NJI9 287 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF701M0R085 212 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 FZD9O00144 591 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 CFHP08603 1231 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF16P17020 682 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 PRKAR1BP31321 381 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 RALGPS1Q5JS13 557 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 DEDD2Q8WXF8 326 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 PNPLA2Q96AD5 504 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC7A6OSQ96CW6 309 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 RPL10LQ96L21 214 aaKnown RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF317Q96PQ6 595 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 GAL3ST4Q96RP7 486 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 MMP27Q9H306 513 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 TMPRSS11EQ9UL52 423 aa11.77□□□□□ -0.53
ERGIC1-208ENST00000520399 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 CPSF4LA6NMK7 179 aaKnown RBP11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 RAB3BP20337 219 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 KHKP50053 298 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC25A11Q02978 314 aaKnown RBP11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 MVKQ03426 396 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 HSPB3Q12988 150 aa11.76□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF404Q494X3 552 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms