RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 MGAT4AQ9UM21 535 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 ITM2BQ9Y287 266 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 PCDHA10Q9Y5I2 948 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 CPQQ9Y646 472 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 NACADO15069 1562 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 IGLV8-61A0A075B6I0 122 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 MACROD2A1Z1Q3 448 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 ANHXE9PGG2 379 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA12O60330 932 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CTAG2O75638 210 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 GCNT3O95395 438 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 INSP01308 110 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CCDC166P0CW27 439 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PTPN2P17706 415 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 AGAP20933 346 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PTGER4P35408 488 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 GJC1P36383 396 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PSMC4P43686 418 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CD81P60033 236 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CD47Q08722 323 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 ASAH1Q13510 395 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 POM121L1PQ3SYA9 428 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 RRAGBQ5VZM2 374 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 TATDN1Q6P1N9 297 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 WDR74Q6RFH5 385 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 LEKR1Q6ZMV7 388 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 GCNT7Q6ZNI0 430 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CCDC117Q8IWD4 279 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PM20D2Q8IYS1 436 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 SDR16C5Q8N3Y7 309 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 BBS1Q8NFJ9 593 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 IL17REQ8NFR9 667 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 OR2AJ1Q8NGZ0 328 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 TBCKQ8TEA7 893 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 UBXN4Q92575 508 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 C11orf52Q96A22 123 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 TWNKQ96RR1 684 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 SLC22A12Q96S37 553 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 NUP85Q9BW27 656 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 CLPBQ9H078 707 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 USP44Q9H0E7 712 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 FGF21Q9NSA1 209 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 ACSS1Q9NUB1 689 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 MIOSQ9NXC5 875 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 RPS6KA6Q9UK32 745 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PNMA8BQ9ULN7 279 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA9Q9Y5G4 932 aaKnown RBP-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA8Q9Y5G5 932 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA7Q9Y5G6 932 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA6Q9Y5G7 932 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCDHGA3Q9Y5H0 932 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 MRFAP1Q9Y605 127 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 SELENOKQ9Y6D0 94 aa-1.6□□□□□ -2.67
SNORA40.16-201ENST00000517238 LTBP2Q14767 1821 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 SETD2Q9BYW2 2564 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 PIKFYVEQ9Y2I7 2098 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 IGHV3-64DA0A0J9YX35 117 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 A0A1W2PPM1 405 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 SLC38A8A6NNN8 435 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 B4DLN1 442 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 KIF28PB7ZC32 967 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 TEX28O15482 410 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 CHST1O43916 411 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 RPP40O75818 363 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 FTCDO95954 541 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NAPSAO96009 420 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MT-CO1P00395 513 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 IGHV3-23P01764 117 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 IGKV5-2P06315 115 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 SPARCP09486 303 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MYOGP15173 224 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 CD1DP15813 335 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 AVPR2P30518 371 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NT5C2P49902 561 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 BYSLQ13895 437 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MLF2Q15773 248 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 PCK2Q16822 640 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 EDRF1Q3B7T1 1238 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 ALDH1L2Q3SY69 923 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 KLF17Q5JT82 389 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 EFCAB2Q5VUJ9 269 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 REP15Q6BDI9 236 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 SIGIRRQ6IA17 410 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 IL20RBQ6UXL0 311 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MCM10Q7L590 875 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MOB1BQ7L9L4 216 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 ADM2Q7Z4H4 148 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NIM1KQ8IY84 436 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NME8Q8N427 588 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 ZNF527Q8NB42 609 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 C1orf162Q8NEQ5 155 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 TNIP2Q8NFZ5 429 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NINJ1Q92982 152 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 LPAR4Q99677 370 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MECRQ9BV79 373 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 PAPOLGQ9BWT3 736 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 MRPL32Q9BYC8 188 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 GLIPR2Q9H4G4 154 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 BPIFA1Q9NP55 256 aa-1.61□□□□□ -2.67
SNORA40.16-201ENST00000517238 NIT2Q9NQR4 276 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms