RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 GLE1Q53GS7 698 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 C2CD6Q53TS8 623 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TCTEX1D4Q5JR98 221 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RALGPS1Q5JS13 557 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CEP85LQ5SZL2 805 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 C1orf185Q5T7R7 199 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 AGBL2Q5U5Z8 902 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 AFMIDQ63HM1 303 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CXorf57Q6NSI4 855 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SCYL2Q6P3W7 929 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM92BQ6ZTR7 304 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RFX8Q6ZV50 586 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CYP4V2Q6ZWL3 525 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GALNTL5Q7Z4T8 443 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KIAA1328Q86T90 577 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 EGFL6Q8IUX8 553 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KBTBD2Q8IY47 623 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RCOR2Q8IZ40 523 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SYCE1Q8N0S2 351 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 OTUD6BQ8N6M0 293 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RTL3Q8N8U3 475 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KCTD6Q8NC69 237 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 UHMK1Q8TAS1 419 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 N4BP2L2Q92802 583 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TADA1Q96BN2 335 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ISOC1Q96CN7 298 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TLCD1Q96CP7 247 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 FAF2Q96CS3 445 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SCMH1Q96GD3 660 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ITCHQ96J02 903 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MARK4Q96L34 752 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ATP6V1G3Q96LB4 118 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CCDC114Q96M63 670 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 C1orf147Q96MC9 270 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TSGA13Q96PP4 275 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 C17orf62Q9BQA9 187 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF670Q9BS34 389 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SIK2Q9H0K1 926 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 EPB41L4BQ9H329 900 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRC19Q9H756 370 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GPATCH2LQ9NWQ4 482 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KLHL28Q9NXS3 571 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF226Q9NYT6 803 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 B4GALT6Q9UBX8 382 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 XPO7Q9UIA9 1087 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ANAPC7Q9UJX3 599 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 VANGL2Q9ULK5 521 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 AP4E1Q9UPM8 1137 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NEU3Q9UQ49 428 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 COQ6Q9Y2Z9 468 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MFHAS1Q9Y4C4 1052 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 HYOU1Q9Y4L1 999 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 WIF1Q9Y5W5 379 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 HS3ST3B1Q9Y662 390 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NCKAP5O14513 1909 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ARHGAP21Q5T5U3 1957 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KIAA1549Q9HCM3 1950 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 VPS13BQ7Z7G8 4022 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SYNJ2BP-COX16A0A087WUM0 186 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 IGHV4-61A0A0C4DH41 118 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 A0A1W2PQ67 120 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ESYT3A0FGR9 886 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MACROD2A1Z1Q3 448 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KLHL33A6NCF5 533 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ARHGAP42A6NI28 874 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 LILRA5A6NI73 299 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 C3orf70A6NLC5 250 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 HMGB1P1B2RPK0 211 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM72CH0Y354 149 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 EEF2KO00418 725 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 BTN3A1O00481 513 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 DAPK3O43293 454 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RAD51CO43502 376 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SPOPO43791 374 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 HS6ST1O60243 411 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PRAMEF11O60813 436 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZMPSTE24O75844 475 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SMNDC1O75940 238 aaKnown RBP eCLIP2.93□□□□□ -1.948e-73■■■■□ 23.1
SCARNA13-201ENST00000516672 UBXN7O94888 489 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 HEXIM1O94992 359 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ATP6V1G2O95670 118 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 POP4O95707 220 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 GSRP00390 522 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KRT14P02533 472 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PCCBP05166 539 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RHOCP08134 193 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 GSTA1P08263 222 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CD63P08962 238 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PRR35P0CG20 571 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SRCP12931 536 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TCP1P17987 556 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ERCC2P18074 760 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 COMTP21964 271 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KDELR1P24390 212 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CCNCP24863 283 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CTNNA2P26232 953 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 IL1R2P27930 398 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms