RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 CACTIN-AS1Q8N1I8 211 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 PIK3R3Q92569 461 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 COL21A1Q96P44 957 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 NECTIN3Q9NQS3 549 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SLC45A1Q9Y2W3 748 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 PRSS21Q9Y6M0 314 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 HAT1O14929 419 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 OAZ2O95190 189 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 CSF2P04141 144 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 KLK1P06870 262 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 ATP1B2P14415 290 aaPredicted RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 ACRV1P26436 265 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 C21orf33P30042 268 aaPredicted RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 RAB25P57735 213 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 RPS13P62277 151 aaKnown RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 ADARB1P78563 741 aaKnown RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 TYSND1Q2T9J0 566 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 RUNDC3AQ59EK9 446 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 GPRC6AQ5T6X5 926 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 NPAS3Q8IXF0 933 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 SLC39A13Q96H72 371 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 ZNF607Q96SK3 696 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 SYT17Q9BSW7 474 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 RIOK2Q9BVS4 552 aaKnown RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 BRINP2Q9C0B6 783 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 POLR2J3Q9H1A7 115 aaKnown RBP9.9□□□□□ -0.83
SMG7-215ENST00000515829 HEBP1Q9NRV9 189 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 IL17CQ9P0M4 197 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 CFL2Q9Y281 166 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 PRKAB1Q9Y478 270 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 CORINQ9Y5Q5 1042 aa9.9□□□□□ -0.83
SMG7-215ENST00000515829 ARNTLO00327 626 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 LAMP1P11279 417 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 TIE1P35590 1138 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 HK3P52790 923 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 CDK6Q00534 326 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SLBPQ14493 270 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMG7-215ENST00000515829 SHQ1Q6PI26 577 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 SERPINA13PQ6UXR4 307 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 FAM217AQ8IXS0 508 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SIX5Q8N196 739 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 RHBDF1Q96CC6 855 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 TRNT1Q96Q11 434 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 UHRF1Q96T88 793 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 BEX2Q9BXY8 128 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SMG9Q9H0W8 520 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 TBC1D17Q9HA65 648 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SLC9A8Q9Y2E8 581 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 POFUT2Q9Y2G5 429 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 YIPF1Q9Y548 306 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 POP4O95707 220 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 BPIP17213 487 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NR4A2P43354 598 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 HNMTP50135 292 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 CRTC2Q53ET0 693 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 NADSYN1Q6IA69 706 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 AGTRAPQ6RW13 159 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 RD3Q7Z3Z2 195 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 B3GNT8Q7Z7M8 397 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 PTPN18Q99952 460 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SPRTNQ9H040 489 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 GORASP2Q9H8Y8 452 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 IL26Q9NPH9 171 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 ACSL6Q9UKU0 697 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 GRM6O15303 877 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NME6O75414 186 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 APOL3O95236 402 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 ADH1CP00326 375 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 CD83Q01151 205 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 EXOC3L2Q2M3D2 409 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 DEFB115Q30KQ5 88 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 RNF130Q86XS8 419 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 PTRH1Q86Y79 214 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 APCDD1Q8J025 514 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 TEX47Q8TBZ9 253 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 C2orf15Q8WU43 125 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 TEFMQ96QE5 360 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 GPN2Q9H9Y4 310 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 FAM120CQ9NX05 1096 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 TMED5Q9Y3A6 229 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SPIN1Q9Y657 262 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 ITIH1P19827 911 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 TACR1P25103 407 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NUP62P37198 522 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 PPP5CP53041 499 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 ATP13A5Q4VNC0 1218 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 DDI2Q5TDH0 399 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NCEH1Q6PIU2 408 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 NEK10Q6ZWH5 1172 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 KRT74Q7RTS7 529 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 MRPL10Q7Z7H8 261 aaKnown RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 ZNF548Q8NEK5 533 aaPredicted RBP9.89□□□□□ -0.83
SMG7-215ENST00000515829 OR8D1Q8WZ84 308 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 ACPTQ9BZG2 426 aa9.89□□□□□ -0.83
SMG7-215ENST00000515829 SP140LQ9H930 580 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms