RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ABRAXAS2Q15018 415 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 GRIK4Q16099 956 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 VMACQ2NL98 169 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 RAB41Q5JT25 222 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 SIRPB2Q5JXA9 342 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PAQR9Q6ZVX9 377 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 C16orf62Q7Z3J2 963 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 FAM124AQ86V42 546 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 SLC44A2Q8IWA5 706 aaPredicted RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 RBFAQ8N0V3 343 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF431Q8TF32 576 aaPredicted RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 NUDT8Q8WV74 236 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ULK4Q96C45 1275 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 HSH2DQ96JZ2 352 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 EXOC2Q96KP1 924 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PPIL3Q9H2H8 161 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 NT5DC2Q9H857 520 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 HHATLQ9HCP6 504 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 GLS2Q9UI32 602 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PCDHGA2Q9Y5H1 932 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 SCN1AP35498 2009 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 LOC285095A0A1B0GVY8 99 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CLDN5O00501 218 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CCL22O00626 93 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 TSC22D2O75157 780 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 IDH2P48735 452 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 RAB14P61106 215 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 TP53BP2Q13625 1128 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 LINC01465Q8N7H1 131 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF366Q8N895 744 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 OR7G3Q8NG95 312 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 WDR36Q8NI36 951 aaKnown RBP12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 SENP8Q96LD8 212 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ANKRA2Q9H9E1 313 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 SERHLQ9NQF3 203 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CLN6Q9NWW5 311 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 USP21Q9UK80 565 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 AKT3Q9Y243 479 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PHIPQ8WWQ0 1821 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ADAMDEC1O15204 470 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 DIRAS1O95057 198 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 WDPCPO95876 746 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 RRASP10301 218 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 TRIM23P36406 574 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CRYBB2P43320 205 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 HK3P52790 923 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 IL2P60568 153 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CDC42P60953 191 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 NRG1Q02297 640 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ALFQ53S48 1182 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MANEALQ5VSG8 457 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MEDAGQ5VYS4 303 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 GOLGA7Q7Z5G4 137 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MILR1Q7Z6M3 343 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SLC37A3Q8NCC5 494 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 TADA1Q96BN2 335 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CDK15Q96Q40 435 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CCM2Q9BSQ5 444 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MED18Q9BUE0 208 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 EMC7Q9NPA0 242 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CUEDC1Q9NWM3 386 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CFAP20Q9Y6A4 193 aaKnown RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 STON1Q9Y6Q2 735 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SBF1O95248 1867 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 FAM170BA6NMN3 283 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 HAS3O00219 553 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 OR7A17O14581 309 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 LYRM1O43325 122 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CYP17A1P05093 508 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 FGF1P05230 155 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ATXN1LP0C7T5 689 aaKnown RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 HLA-DPA1P20036 260 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SDC2P34741 201 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MAPKAPK2P49137 400 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CLDN8P56748 225 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 PPP3R1P63098 170 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ITKQ08881 620 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms