RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ARL15Q9NXU5 204 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 UTP6Q9NYH9 597 aaKnown RBP7.98□□□□□ -1.13
CCL28-204ENST00000514421 STOX2Q9P2F5 926 aaPredicted RBP7.98□□□□□ -1.13
CCL28-204ENST00000514421 PADI1Q9ULC6 663 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 SNX7Q9UNH6 387 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 PLCL2Q9UPR0 1127 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 KLHL20Q9Y2M5 609 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 PCDHB3Q9Y5E6 796 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 KLK4Q9Y5K2 254 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 PTPRQQ9UMZ3 2332 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 FREM2Q5SZK8 3169 aa7.98□□□□□ -1.13
CCL28-204ENST00000514421 USP24Q9UPU5 2620 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 E7EQ34 232 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 SCRG1O75711 98 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 WFS1O76024 890 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 CBX6O95503 412 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 DLGAP3O95886 979 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 NTRK1P04629 796 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 CHRNGP07510 517 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 FGF4P08620 206 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ANXA5P08758 320 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 KRT16P08779 473 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 HBQ1P09105 142 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 KITP10721 976 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 HOXB1P14653 301 aaPredicted RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 ZNF28P17035 718 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 CCND1P24385 295 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 HRH2P25021 359 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 IMPA1P29218 277 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 GABRA4P48169 554 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ITGA1P56199 1179 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 CDKL1Q00532 357 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 RELAQ04206 551 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TLE3Q04726 772 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ABHD18Q0P651 414 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 NAE1Q13564 534 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 PHKG1Q16816 387 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 MANEAQ5SRI9 462 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ZNF678Q5SXM1 525 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 THEMIS2Q5TEJ8 643 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ICE2Q659A1 982 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 CAPN13Q6MZZ7 669 aaPredicted RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 TLDC1Q6P9B6 456 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 C19orf48Q6RUI8 117 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 SBSNQ6UWP8 590 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TIPARPQ7Z3E1 657 aaKnown RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 ADAMTSL2Q86TH1 951 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TMEM126BQ8IUX1 230 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 GPR135Q8IZ08 494 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 SPATA6LQ8N4H0 392 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 IL22RA1Q8N6P7 574 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 PPFIBP2Q8ND30 876 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 STAG3L4Q8TBR4 150 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 FBXL8Q96CD0 374 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 BTBD10Q9BSF8 475 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 DPH7Q9BTV6 452 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 EFHD1Q9BUP0 239 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ULBP3Q9BZM4 244 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 SPRTNQ9H040 489 aaPredicted RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 ATG10Q9H0Y0 220 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 EML4Q9HC35 981 aaKnown RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 WDR70Q9NW82 654 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ANKMY1Q9P2S6 941 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 MARCOQ9UEW3 520 aaPredicted RBP7.97□□□□□ -1.13
CCL28-204ENST00000514421 TAGLN3Q9UI15 199 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 ZDHHC2Q9UIJ5 367 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 IKZF3Q9UKT9 509 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TRIM33Q9UPN9 1127 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 AP1M2Q9Y6Q5 423 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 PKD1L2Q7Z442 2459 aa7.97□□□□□ -1.13
CCL28-204ENST00000514421 TRPC5OSA6NMA1 111 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 SYCE1LA8MT33 242 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 H0YHG0 523 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 STX16-NPEPL1H3BU86 382 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 H7BY64 318 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 STX16O14662 325 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 EFSO43281 561 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 ZNF749O43361 778 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 HCRTR1O43613 425 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 CPNE3O75131 537 aaKnown RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 OR2B3O76000 313 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 TIAF1O95411 115 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 GUCA1CO95843 209 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 KLK3P07288 261 aaPredicted RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 NPPBP16860 134 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 PSMB5P28074 263 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 HNMTP50135 292 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 MNAT1P51948 309 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 YBX1P67809 324 aaKnown RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 IRX1P78414 480 aaPredicted RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 OR4D1Q15615 310 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 TSNQ15631 228 aaKnown RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 ZXDCQ2QGD7 858 aaPredicted RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 UNC50Q53HI1 259 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 TCTE1Q5JU00 501 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 CDKL4Q5MAI5 379 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 FBXW10Q5XX13 1052 aa7.96□□□□□ -1.14
CCL28-204ENST00000514421 METTL2BQ6P1Q9 378 aaKnown RBP7.96□□□□□ -1.14
CCL28-204ENST00000514421 LCTLQ6UWM7 567 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms