RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	STUB1	Q9UNE7	303 aa		4.99	□□□□□ -1.61
LINC01088-208	ENST00000511895	RPS6KL1	Q9Y6S9	549 aa		4.99	□□□□□ -1.61
LINC01088-208	ENST00000511895	TONSL	Q96HA7	1378 aa		4.99	□□□□□ -1.61
LINC01088-208	ENST00000511895	IGKV3D-15	A0A087WSY6	115 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895		A0A087X002	238 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	TRIM77	I1YAP6	450 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	FIBP	O43427	364 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	DIAPH2	O60879	1101 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	IGHV2-70	P01814	119 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	GPI	P06744	558 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	ADRB2	P07550	413 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	ZNF883	P0CG24	379 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	IL11	P20809	199 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	KRT20	P35900	424 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	CCR10	P46092	362 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	PPARD	Q03181	441 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	TAF10	Q12962	218 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	VWC2	Q2TAL6	325 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	PRR27	Q6MZM9	219 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	KIRREL3	Q8IZU9	778 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	DYRK2	Q92630	601 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	MOB3A	Q96BX8	217 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	OR2B2	Q9GZK3	357 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	PLCXD1	Q9NUJ7	323 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	EPHA6	Q9UF33	1036 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	RASAL2	Q9UJF2	1139 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	GRID1	Q9ULK0	1009 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	TTLL3	Q9Y4R7	772 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	WDR87	Q6ZQQ6	2873 aa		4.98	□□□□□ -1.61
LINC01088-208	ENST00000511895	LRRC37A2	A6NM11	1700 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	ZSWIM8	A7E2V4	1837 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	CEP250	Q9BV73	2442 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	DMXL1	Q9Y485	3027 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	MYO18B	Q8IUG5	2567 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895		A0A1W2PPM1	405 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895		A0A1W2PPQ1	181 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	C2orf81	A6NN90	581 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	NTN3	O00634	580 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	MYBL1	P10243	752 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	CEBPB	P17676	345 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	CPT2	P23786	658 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	CSTF2	P33240	577 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	SLC6A12	P48065	614 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	VEGFC	P49767	419 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	PTPRCAP	Q14761	206 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	SGSM1	Q2NKQ1	1148 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	UGT3A2	Q3SY77	523 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	MCMDC2	Q4G0Z9	681 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	SLC25A53	Q5H9E4	307 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	ARMC4	Q5T2S8	1044 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	ZC2HC1B	Q5TFG8	222 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	LGI2	Q8N0V4	545 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	MARVELD2	Q8N4S9	558 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	ARHGAP45	Q92619	1136 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	ZNF653	Q96CK0	615 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	PGAP3	Q96FM1	320 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	LINC00615	Q96LM1	132 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	FAM20A	Q96MK3	541 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	PRRG4	Q9BZD6	226 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	CPVL	Q9H3G5	476 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	NKIRAS2	Q9NYR9	191 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	DNAH12	Q6ZR08	3092 aa		4.97	□□□□□ -1.61
LINC01088-208	ENST00000511895	EPHB6	O15197	1021 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	SPRY1	O43609	319 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	DDHD2	O94830	711 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	DARS	P14868	501 aa	Known RBP	4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	IRX1	P78414	480 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	NUCB1	Q02818	461 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	VEZF1	Q14119	521 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	TNIP1	Q15025	636 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	HERC3	Q15034	1050 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	CRY2	Q49AN0	593 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	XKR3	Q5GH77	459 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	MMD2	Q8IY49	270 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	LSMEM2	Q8N112	164 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	PRSS33	Q8NF86	280 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	OPRPN	Q99935	248 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR6C2	Q9NZP2	312 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	WDR37	Q9Y2I8	494 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	RIC1	Q4ADV7	1423 aa		4.96	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF195	O14628	629 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	TCERG1	O14776	1098 aa	Known RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ARPC2	O15144	300 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ARHGEF9	O43307	516 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	PPIP5K2	O43314	1243 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	C22orf31	O95567	290 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ACSL3	O95573	720 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	IRF2	P14316	349 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	EEF1B2	P24534	225 aa	Known RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	AZGP1	P25311	298 aa	Known RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	CLK1	P49759	484 aa	Known RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ASCL1	P50553	236 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	GCNT1	Q02742	428 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	CUL3	Q13618	768 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	RASA2	Q15283	850 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	FCN2	Q15485	313 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	PHKG1	Q16816	387 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	SLC35D3	Q5M8T2	416 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms