RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DRC3Q9H069 523 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 MRPL46Q9H2W6 279 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 EHD1Q9H4M9 534 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 NT5DC2Q9H857 520 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC22A11Q9NSA0 550 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 ZNF358Q9NW07 568 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 GEMIN8Q9NWZ8 242 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 CPSF2Q9P2I0 782 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 OPTCQ9UBM4 332 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 TBK1Q9UHD2 729 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 ZFP69BQ9UJL9 534 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 TMCO1Q9UM00 188 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 TNPO3Q9Y5L0 923 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 MAU2Q9Y6X3 613 aa6.81□□□□□ -1.32
PDLIM5-215ENST00000511586 SNRNP200O75643 2136 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 A0A0A6YYC8 382 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 A0A1W2PPM1 405 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TLDC2A0PJX2 215 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 CDC14CA4D256 554 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 URADA6NGE7 173 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SMIM23A6NLE4 172 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 H0YIG0 161 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 I3L1I5 382 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 GOLGA8RI6L899 631 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 NDUFS4O43181 175 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SMIM24O75264 130 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 CDH16O75309 829 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 KLF7O75840 302 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 STATHP02808 62 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SERPIND1P05546 499 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 GSTA1P08263 222 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 FURINP09958 794 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 NUDT17P0C025 328 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PYGBP11216 843 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 EPB42P16452 691 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 KRT15P19012 456 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 FBLP22087 321 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 VARSP26640 1264 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 GSTM2P28161 218 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 FOLR3P41439 243 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 CASP2P42575 452 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SLCO1A2P46721 670 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 AVPR1BP47901 424 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PIK3CGP48736 1102 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 AGTR2P50052 363 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 NFKB2Q00653 900 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 IRF8Q02556 426 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 OCA2Q04671 838 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 RGS1Q08116 209 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PCDH1Q08174 1060 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 LAPTM5Q13571 262 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 DSG2Q14126 1118 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 DOC2AQ14183 400 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SLBPQ14493 270 aaKnown RBP eCLIP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SSPNQ14714 243 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC9A5Q14940 896 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PCBP2Q15366 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TBCCQ15814 346 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TBR1Q16650 682 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 HIST2H2ACQ16777 129 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 DEFB109BQ30KR1 87 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 KRT71Q3SY84 523 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 XKR6Q5GH73 641 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PAGE2BQ5JRK9 111 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ATP1A1-AS1Q5TC04 95 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 HIST2H2AA3Q6FI13 130 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 BORAQ6PGQ7 559 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TMIGD1Q6UXZ0 262 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 COX15Q7KZN9 410 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PKD1L2Q7Z442 2459 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 CROCCP2Q86T23 111 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 DTWD1Q8N5C7 304 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 METTL27Q8N6F8 245 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TEX9Q8N6V9 391 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ANKRD53Q8N9V6 530 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 KCT2Q8NC54 265 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 NT5CQ8TCD5 201 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 EPS8L3Q8TE67 593 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 MZB1Q8WU39 189 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 APOBEC4Q8WW27 367 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 TTC9Q92623 222 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PHF21BQ96EK2 531 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 WDR34Q96EX3 536 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PTCD3Q96EY7 689 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 WBP1Q96G27 269 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SEC16BQ96JE7 1060 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PKNOX2Q96KN3 472 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SH3GL2Q99962 352 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 MACROD1Q9BQ69 325 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 EFCAB11Q9BUY7 163 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC26A1Q9H2B4 701 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SPNS1Q9H2V7 528 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 CENPHQ9H3R5 247 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 WDR54Q9H977 334 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ANKHQ9HCJ1 492 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 COPG2Q9UBF2 871 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 XPR1Q9UBH6 696 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms