RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 KRT38O76015 456 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 KLHL2O95198 593 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 B3GALT4O96024 378 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ALBP02768 609 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 C1GALT1C1LP0DN25 315 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 GNAZP19086 355 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 NR1D1P20393 614 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 GCAP28676 217 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 GGT5P36269 586 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 SLC26A3P40879 764 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 HNF4AP41235 474 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 SCTRP47872 440 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 OCA2Q04671 838 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 DSG2Q14126 1118 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 FAM83EQ2M2I3 478 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 CDKL4Q5MAI5 379 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.29
DDX41-212ENST00000511040 TBC1D19Q8N5T2 526 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ANKRD53Q8N9V6 530 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 C9orf43Q8TAL5 461 aaPredicted RBP13.27□□□□□ -0.29
DDX41-212ENST00000511040 STT3BQ8TCJ2 826 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 MIEF2Q96C03 454 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 GPR78Q96P69 363 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 MESP1Q9BRJ9 268 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ING2Q9H160 280 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 SLC26A1Q9H2B4 701 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 WDR54Q9H977 334 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 CNOT10Q9H9A5 744 aaKnown RBP13.27□□□□□ -0.29
DDX41-212ENST00000511040 ACSS2Q9NR19 701 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ZNF358Q9NW07 568 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 HCN3Q9P1Z3 774 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
DDX41-212ENST00000511040 PIEZO2Q9H5I5 2752 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 SCN3AQ9NY46 2000 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ZNF860A6NHJ4 632 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 PEX12O00623 359 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 ALOX12BO75342 701 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 H2AFYO75367 372 aaKnown RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 ZGLP1P0C6A0 271 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 SLC35G6P0C7Q6 338 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 SFTPCP11686 197 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 MTHFD2P13995 350 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 MAGEA12P43365 314 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 AVPR1BP47901 424 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 KLC1Q07866 573 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 FAM53BQ14153 422 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 SLBPQ14493 270 aaKnown RBP eCLIP13.26□□□□□ -0.29
DDX41-212ENST00000511040 SLC29A2Q14542 456 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 PDK4Q16654 411 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 ATG9BQ674R7 924 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 KLC3Q6P597 504 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 LAPTM4BQ86VI4 370 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 PTRH1Q86Y79 214 aaKnown RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 APLFQ8IW19 511 aaPredicted RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
DDX41-212ENST00000511040 MVB12AQ96EY5 273 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 SCYL1Q96KG9 808 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 CRB3Q9BUF7 120 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 CD244Q9BZW8 370 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 SLC25A18Q9H1K4 315 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 ANKZF1Q9H8Y5 726 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 ZFP69BQ9UJL9 534 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 NXT1Q9UKK6 140 aaKnown RBP13.26□□□□□ -0.29
DDX41-212ENST00000511040 TP53TG5Q9Y2B4 290 aa13.26□□□□□ -0.29
DDX41-212ENST00000511040 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 ESPNB1AK53 854 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 MKRN2OSH3BPM6 223 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 MAP2K7O14733 419 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 CLGNO14967 610 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 PRPF4O43172 522 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX41-212ENST00000511040 RDH16O75452 317 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 JRKO75564 520 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 KLHL18O94889 574 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 SNRPAP09012 282 aaKnown RBP13.25□□□□□ -0.29
DDX41-212ENST00000511040 ZNF888P0CJ79 500 aaPredicted RBP13.25□□□□□ -0.29
DDX41-212ENST00000511040 GFAPP14136 432 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 EPORP19235 508 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 MMP11P24347 488 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 CNTFP26441 200 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 RGS1Q08116 209 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 RAPSNQ13702 412 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 ACAP2Q15057 778 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 RBBP7Q16576 425 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 PFKFB4Q16877 469 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 XKR6Q5GH73 641 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 TOR1AIP1Q5JTV8 583 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 LRRC70Q7Z2Q7 622 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms