RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TXNDC9O14530 226 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
DDR1-260ENST00000507533 PSMA3P25788 255 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 AOAHP28039 575 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 TPP2P29144 1249 aaPredicted RBP13.04□□□□□ -0.32
DDR1-260ENST00000507533 PTPN7P35236 360 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
DDR1-260ENST00000507533 TMED2Q15363 201 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 NDUFA9Q16795 377 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 PAMR1Q6UXH9 720 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 ZNF227Q86WZ6 799 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 SULF2Q8IWU5 870 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 KRT222Q8N1A0 295 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 GSDMBQ8TAX9 411 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 SKA2Q8WVK7 121 aaPredicted RBP13.04□□□□□ -0.32
DDR1-260ENST00000507533 LPAR4Q99677 370 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 OSBPL8Q9BZF1 889 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 SLC6A16Q9GZN6 736 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 MRFAP1Q9Y605 127 aa13.04□□□□□ -0.32
DDR1-260ENST00000507533 FN1P02751 2386 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 IGKV1-8A0A0C4DH67 115 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 MROH6A6NGR9 719 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 KLRC4-KLRK1H3BQV0 150 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 APOC4-APOC2K7ER74 178 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 P2RX6O15547 441 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 APOC2P02655 101 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 RAF1P04049 648 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 HOXC12P31275 282 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 XCR1P46094 333 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 ITGA8P53708 1063 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 USP10Q14694 798 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 CDKL3Q8IVW4 592 aaPredicted RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 SPATA13Q96N96 652 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 TRIM45Q9H8W5 580 aaPredicted RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 HCN3Q9P1Z3 774 aa13.03□□□□□ -0.32
DDR1-260ENST00000507533 RUVBL2Q9Y230 463 aaKnown RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 KLF13Q9Y2Y9 288 aaPredicted RBP13.03□□□□□ -0.32
DDR1-260ENST00000507533 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 PEX1O43933 1283 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 ATE1O95260 518 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 LY6G6DO95868 133 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 EZRP15311 586 aaKnown RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 RPA3P35244 121 aaPredicted RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 CCNFP41002 786 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 ZFP36L2P47974 494 aaKnown RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 HLCSP50747 726 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 SLC26A5P58743 744 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 KEAP1Q14145 624 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 NSDHLQ15738 373 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 GXYLT1Q4G148 440 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 CCDC38Q502W7 563 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 AADACL2Q6P093 401 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 SUSD1Q6UWL2 747 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 KLHDC8BQ8IXV7 354 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 MAGEC3Q8TD91 643 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 MCOLN3Q8TDD5 553 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 ELP5Q8TE02 316 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 DEFB127Q9H1M4 99 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 ZNF395Q9H8N7 513 aaPredicted RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 TRMT1Q9NXH9 659 aaKnown RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 CRIM1Q9NZV1 1036 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 PCYOX1Q9UHG3 505 aa13.02□□□□□ -0.33
DDR1-260ENST00000507533 HRNRQ86YZ3 2850 aaPredicted RBP13.02□□□□□ -0.33
DDR1-260ENST00000507533 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 CSPG4Q6UVK1 2322 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 A6NNC1 897 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 NPIPA2E9PIF3 369 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 NPIPA3F8WFD2 350 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 TJP3O95049 919 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 NSA2O95478 260 aaKnown RBP13.01□□□□□ -0.33
DDR1-260ENST00000507533 GOT2P00505 430 aaKnown RBP13.01□□□□□ -0.33
DDR1-260ENST00000507533 STATHP02808 62 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 PCSK6P29122 969 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 TRHRP34981 398 aaPredicted RBP13.01□□□□□ -0.33
DDR1-260ENST00000507533 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
DDR1-260ENST00000507533 OR4D2P58180 307 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 MLF1P58340 268 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 TSTA3Q13630 321 aaPredicted RBP13.01□□□□□ -0.33
DDR1-260ENST00000507533 ABRAXAS2Q15018 415 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 KCTD11Q693B1 232 aa13.01□□□□□ -0.33
DDR1-260ENST00000507533 ZNF425Q6IV72 752 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms