RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BTBD9Q96Q07 612 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 RASL10BQ96S79 203 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 LPAR4Q99677 370 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ZNF559Q9BR84 538 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SLC39A8Q9C0K1 460 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 C10orf88Q9H8K7 445 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 IL1RAPL2Q9NP60 686 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 C19orf25Q9UFG5 118 aaPredicted RBP3.02□□□□□ -1.93
LSM6-205ENST00000507449 PRDM4Q9UKN5 801 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 AGTPBP1Q9UPW5 1226 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ANGPTL3Q9Y5C1 460 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ACEP12821 1306 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 E5RGE8 158 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 MLNRO43193 412 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 ZFAND5O76080 213 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 GLCEO94923 617 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 YES1P07947 543 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 HMBSP08397 361 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 UROSP10746 265 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 CEBPBP17676 345 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 RBMS1P29558 406 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 SRD5A2P31213 254 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 SERPINB6P35237 376 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 SOX3P41225 446 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 NR0B1P51843 470 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 SNU13P55769 128 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 KCNJ10P78508 379 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 LASP1Q14847 261 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 ZNF542PQ5EBM4 170 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PWWP2BQ6NUJ5 590 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 SIGLEC15Q6ZMC9 328 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 COX8CQ7Z4L0 72 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 CCDC91Q7Z6B0 441 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PTAR1Q7Z6K3 402 aaPredicted RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 PHLDB2Q86SQ0 1253 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 CCDC83Q8IWF9 413 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 KLHDC8AQ8IYD2 350 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 CLYBLQ8N0X4 340 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 GPC2Q8N158 579 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PRSS35Q8N3Z0 413 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 SFRP1Q8N474 314 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 CARNMT1Q8N4J0 409 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 GPRC5AQ8NFJ5 357 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 OR4C15Q8NGM1 316 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 OR10G8Q8NGN5 311 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 SMAP2Q8WU79 429 aaPredicted RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 BCL2L2Q92843 193 aaPredicted RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 EPSTI1Q96J88 318 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 C2orf48Q96LS8 159 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 NECTIN4Q96NY8 510 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PANX3Q96QZ0 392 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PRMT1Q99873 361 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 FUCA2Q9BTY2 467 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 RNF121Q9H920 327 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PPANQ9NQ55 473 aaKnown RBP3.01□□□□□ -1.93
LSM6-205ENST00000507449 TBC1D13Q9NVG8 400 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 IL36AQ9UHA7 158 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 FBXL5Q9UKA1 691 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 GMEB2Q9UKD1 530 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 NSG2Q9Y328 171 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 NOTCH4Q99466 2003 aa3.01□□□□□ -1.93
LSM6-205ENST00000507449 PFASO15067 1338 aa3□□□□□ -1.93
LSM6-205ENST00000507449 LRRD1A4D1F6 860 aa3□□□□□ -1.93
LSM6-205ENST00000507449 RTCAO00442 366 aaKnown RBP3□□□□□ -1.93
LSM6-205ENST00000507449 GRID2O43424 1007 aa3□□□□□ -1.93
LSM6-205ENST00000507449 KIF5CO60282 957 aa3□□□□□ -1.93
LSM6-205ENST00000507449 KINO60870 393 aaKnown RBP3□□□□□ -1.93
LSM6-205ENST00000507449 ATP9AO75110 1047 aa3□□□□□ -1.93
LSM6-205ENST00000507449 SAP30O75446 220 aa3□□□□□ -1.93
LSM6-205ENST00000507449 AKAP3O75969 853 aa3□□□□□ -1.93
LSM6-205ENST00000507449 CLDN1O95832 211 aa3□□□□□ -1.93
LSM6-205ENST00000507449 C8orf89P0DMQ9 161 aa3□□□□□ -1.93
LSM6-205ENST00000507449 VDRP11473 427 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ZNF26P17031 533 aaPredicted RBP3□□□□□ -1.93
LSM6-205ENST00000507449 CETN2P41208 172 aa3□□□□□ -1.93
LSM6-205ENST00000507449 OR3A2P47893 321 aa3□□□□□ -1.93
LSM6-205ENST00000507449 KHKP50053 298 aa3□□□□□ -1.93
LSM6-205ENST00000507449 NME5P56597 212 aa3□□□□□ -1.93
LSM6-205ENST00000507449 DCDC1P59894 354 aa3□□□□□ -1.93
LSM6-205ENST00000507449 STX1BP61266 288 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ARHGAP1Q07960 439 aa3□□□□□ -1.93
LSM6-205ENST00000507449 HNRNPDQ14103 355 aaKnown RBP3□□□□□ -1.93
LSM6-205ENST00000507449 TMEM132DQ14C87 1099 aa3□□□□□ -1.93
LSM6-205ENST00000507449 MORF4L2Q15014 288 aa3□□□□□ -1.93
LSM6-205ENST00000507449 PTPN14Q15678 1187 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ZNF789Q5FWF6 425 aa3□□□□□ -1.93
LSM6-205ENST00000507449 DDX59Q5T1V6 619 aaKnown RBP eCLIP3□□□□□ -1.93
LSM6-205ENST00000507449 PRAMEF8Q5VWM4 474 aa3□□□□□ -1.93
LSM6-205ENST00000507449 PLBD1Q6P4A8 553 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ARHGAP11AQ6P4F7 1023 aa3□□□□□ -1.93
LSM6-205ENST00000507449 DHRS11Q6UWP2 260 aa3□□□□□ -1.93
LSM6-205ENST00000507449 Q6ZRP5 223 aa3□□□□□ -1.93
LSM6-205ENST00000507449 FAM89BQ8N5H3 189 aa3□□□□□ -1.93
LSM6-205ENST00000507449 NIPA2Q8N8Q9 360 aa3□□□□□ -1.93
LSM6-205ENST00000507449 CD99L2Q8TCZ2 262 aa3□□□□□ -1.93
LSM6-205ENST00000507449 RNASE8Q8TDE3 154 aaKnown RBP3□□□□□ -1.93
LSM6-205ENST00000507449 ZNRF4Q8WWF5 429 aa3□□□□□ -1.93
LSM6-205ENST00000507449 CKAP2Q8WWK9 683 aa3□□□□□ -1.93
LSM6-205ENST00000507449 KRT35Q92764 455 aa3□□□□□ -1.93
LSM6-205ENST00000507449 NXPE2Q96DL1 559 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms