RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971		A0A1W2PR77	199 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MACROD2	A1Z1Q3	448 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SMIM30	A4D0T7	59 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	C17orf100	A8MU93	164 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971		H0YCG3	227 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	LDB2	O43679	373 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SHOX2	O60902	331 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	AKAP3	O75969	853 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ERLIN2	O94905	339 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TDP2	O95551	362 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	IL1A	P01583	271 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MMP2	P08253	660 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	VIM	P08670	466 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ABHD2	P08910	425 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RHOXF2B	P0C7M4	288 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	GZMA	P12544	262 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	PRG2	P13727	222 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ENO3	P13929	434 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MMP9	P14780	707 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CYP11B2	P19099	503 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	AHCY	P23526	432 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TMOD1	P28289	359 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	C21orf33	P30042	268 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CCND2	P30279	289 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	USP8	P40818	1118 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MDH1	P40925	334 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ARCN1	P48444	511 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ARSE	P51690	589 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RUNX1T1	Q06455	604 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RIPK1	Q13546	671 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	FGFBP1	Q14512	234 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TAZ	Q16635	292 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	EXOC3L4	Q17RC7	722 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	QRICH1	Q2TAL8	776 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ZNF284	Q2VY69	593 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CBWD6	Q4V339	395 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CBWD3	Q5JTY5	395 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RIPPLY2	Q5TAB7	128 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SHE	Q5VZ18	495 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	PLA2G4F	Q68DD2	849 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	KRT39	Q6A163	491 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	NCAPH2	Q6IBW4	605 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CDC42EP5	Q6NZY7	148 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SPSB3	Q6PJ21	355 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SEPT14	Q6ZU15	432 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	NIPA1	Q7RTP0	329 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	HAUS6	Q7Z4H7	955 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ABI3BP	Q7Z7G0	1075 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	EXOC3L1	Q86VI1	746 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	GPBP1	Q86WP2	473 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CD302	Q8IX05	232 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	C12orf56	Q8IXR9	622 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	EFCAB13	Q8IY85	973 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SCAI	Q8N9R8	606 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	NOA1	Q8NC60	698 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SETD9	Q8NE22	299 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CFAP61	Q8NHU2	1237 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ACTRT1	Q8TDG2	376 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CHURC1	Q8WUH1	139 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SCFD1	Q8WVM8	642 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SLITRK1	Q96PX8	696 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RIT2	Q99578	217 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RHOXF2	Q9BQY4	288 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TBCD	Q9BTW9	1192 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ACPT	Q9BZG2	426 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	RAB17	Q9H0T7	212 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	KIF9	Q9HAQ2	790 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	VAT1L	Q9HCJ6	419 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TM9SF3	Q9HD45	589 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ENTPD7	Q9NQZ7	604 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	NMRK1	Q9NWW6	199 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SPAST	Q9UBP0	616 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	UPB1	Q9UBR1	384 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MALT1	Q9UDY8	824 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	LCMT1	Q9UIC8	334 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	FBXW2	Q9UKT8	454 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ITGA11	Q9UKX5	1188 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ZNF148	Q9UQR1	794 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TDRKH	Q9Y2W6	561 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	TEX264	Q9Y6I9	313 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	CKAP5	Q14008	2032 aa		4.15	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	LOC285556	D6RIA3	1793 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	SCN9A	Q15858	1988 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	ARID2	Q68CP9	1835 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971		A0A0G2JPF8	293 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	C17orf102	A2RUQ5	167 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MAGEB17	A8MXT2	336 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	MIF4GD	A9UHW6	222 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	HNRNPCL3	B7ZW38	293 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971		F5H6K3	240 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	PGRMC1	O00264	195 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	POLR3G	O15318	223 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	PLRG1	O43660	514 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	LDB3	O75112	727 aa		4.14	□□□□□ -1.75
CALCOCO2-208	ENST00000506971	KIAA0754	O94854	1291 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms