RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SPP1P10451 314 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 DARSP14868 501 aaKnown RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 CASTP20810 708 aaKnown RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 CSTF2P33240 577 aaKnown RBP eCLIP5.37□□□□□ -1.55
HERC4-213ENST00000506515 GMPSP49915 693 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 MAZP56270 477 aaKnown RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 CLDN15P56746 228 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 TUBB4BP68371 445 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 GPR17Q13304 367 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 SQLEQ14534 574 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 PKN2Q16513 984 aaKnown RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 SLC35E4Q6ICL7 350 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 CEACAM20Q6UY09 585 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 MSANTD1Q6ZTZ1 278 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 USP50Q70EL3 339 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 GPC2Q8N158 579 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 OR10V1Q8NGI7 309 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 OR10Q1Q8NGQ4 319 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 BSCL2Q96G97 398 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 VMP1Q96GC9 406 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 UHRF2Q96PU4 802 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 OR2B2Q9GZK3 357 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ZMYND12Q9H0C1 365 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 VPS33BQ9H267 617 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 MINDY3Q9H8M7 445 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 COPS7BQ9H9Q2 264 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 SDF2L1Q9HCN8 221 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ARMCX3Q9UH62 379 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 TNNQ9UQP3 1299 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 LRP12Q9Y561 859 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ZFP37Q9Y6Q3 630 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 A0A1W2PP64 1363 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 MEGF6O75095 1541 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ZNF831Q5JPB2 1677 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 C4AP0C0L4 1744 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 PPIP5K2O43314 1243 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 PRAF2O60831 178 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 SUPT20HL2P0C7V6 817 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 STAG3L1P0CL83 205 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 IGHV4-31P0DP07 118 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 CA6P23280 308 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 PSMB4P28070 264 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 EPHX2P34913 555 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 NKX2-1P43699 371 aaPredicted RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 KCNJ1P48048 391 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 ALDH3A2P51648 485 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 VAMP7P51809 220 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 MFAP3P55082 362 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 KRT83P78385 493 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 GCNT1Q02742 428 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 HNRNPA0Q13151 305 aaKnown RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 NFE2L1Q14494 772 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 HERC3Q15034 1050 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 E2F5Q15329 346 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 FAM174BQ3ZCQ3 159 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 ZNF449Q6P9G9 518 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 MARK2Q7KZI7 788 aaKnown RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 NHLRC2Q8NBF2 726 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 NOA1Q8NC60 698 aaKnown RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 GDAP1Q8TB36 358 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 CAPNS2Q96L46 248 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 GPATCH1Q9BRR8 931 aaKnown RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 SIX2Q9NPC8 291 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 ERAP1Q9NZ08 941 aa5.36□□□□□ -1.55
HERC4-213ENST00000506515 BRCA1P38398 1863 aaKnown RBP5.36□□□□□ -1.55
HERC4-213ENST00000506515 CCDC88AQ3V6T2 1871 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 PKD1L3Q7Z443 1732 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 C5orf52A6NGY3 159 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 PSMD14O00487 310 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 IKBKBO14920 756 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 FCGR3BO75015 233 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 RLN1P04808 185 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 CDR2Q01850 454 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 YWHAHQ04917 246 aaPredicted RBP5.35□□□□□ -1.55
HERC4-213ENST00000506515 TAZQ16635 292 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 SLC35D3Q5M8T2 416 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 OR4A47Q6IF82 309 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 SH2D5Q6ZV89 423 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 SMIM5Q71RC9 77 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 OTOAQ7RTW8 1153 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 AMIGO1Q86WK6 493 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 IQCA1Q86XH1 822 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 DCUN1D3Q8IWE4 304 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 APCDD1Q8J025 514 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 DNASE1L2Q92874 299 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 PYCR2Q96C36 320 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 ZNF524Q96C55 264 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 LMAN1LQ9HAT1 526 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 FLRT3Q9NZU0 649 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 ZNF624Q9P2J8 865 aaPredicted RBP5.35□□□□□ -1.55
HERC4-213ENST00000506515 ITGA11Q9UKX5 1188 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 KCNJ14Q9UNX9 436 aa5.35□□□□□ -1.55
HERC4-213ENST00000506515 DICER1Q9UPY3 1922 aaKnown RBP5.35□□□□□ -1.55
HERC4-213ENST00000506515 HEG1Q9ULI3 1381 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 IGHV4-61A0A0C4DH41 118 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms