RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PSMB5P28074 263 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 GCGRP47871 477 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 SCTRP47872 440 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ZNF33BQ06732 778 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ZNF460Q14592 562 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 PCBP2Q15366 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 DEFB110Q30KQ9 67 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TMEM35AQ53FP2 167 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TMPRSS11BQ86T26 416 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 VASH2Q86V25 355 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MREGQ8N565 214 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ENDOVQ8N8Q3 282 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 SNX31Q8N9S9 440 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 CLEC1AQ8NC01 280 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 NT5CQ8TCD5 201 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 METTL21AQ8WXB1 218 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 NEIL2Q969S2 332 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MIEF2Q96C03 454 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 PYCR2Q96C36 320 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 NXNL1Q96CM4 212 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TM4SF19Q96DZ7 209 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MRRFQ96E11 262 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 OR1F2PQ96R84 312 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ATOH8Q96SQ7 321 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 NPLQ9BXD5 320 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TXLNGYQ9BZA5 131 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 IQCGQ9H095 443 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 STMN4Q9H169 189 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 CPNE5Q9HCH3 593 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ACSS2Q9NR19 701 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MRPS33Q9Y291 106 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MAN2B2Q9Y2E5 1009 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 SNRNP200O75643 2136 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MDC1Q14676 2089 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 IGLV3-12A0A075B6K2 115 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 IGKV1-8A0A0C4DH67 115 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 NCF1BA6NI72 391 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 NCF1CA8MVU1 366 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PSMD12O00232 456 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 HAT1O14929 419 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 KLK8O60259 260 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 GLRA3O75311 464 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 FAM155BO75949 473 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 ALPPP05187 535 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 NUDT17P0C025 328 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MYZAPP0CAP1 466 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 NCF1P14598 390 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 ALOX12P18054 663 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MMP11P24347 488 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PIK3CBP42338 1070 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 AGTR2P50052 363 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 CSRP3P50461 194 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 REEP5Q00765 189 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 SETDB1Q15047 1291 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 RBBP5Q15291 538 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 XKR6Q5GH73 641 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MED27Q6P2C8 311 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 TRIM40Q6P9F5 258 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 CMC1Q7Z7K0 106 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 RDH11Q8TC12 318 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PPP4R1Q8TF05 950 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MMABQ96EY8 250 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 RHBGQ9H310 441 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 ATP13A2Q9NQ11 1180 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 IGSF5Q9NSI5 407 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 GEMIN8Q9NWZ8 242 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 MS4A12Q9NXJ0 267 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 AHSPQ9NZD4 102 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 C5AR2Q9P296 337 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 DHCR7Q9UBM7 475 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PPT2Q9UMR5 302 aa9.38□□□□□ -0.91
NR1I3-220ENST00000505005 RUVBL1Q9Y265 456 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 PCDHGA9Q9Y5G4 932 aaKnown RBP9.38□□□□□ -0.91
NR1I3-220ENST00000505005 DMXL2Q8TDJ6 3036 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 SPTBP11277 2137 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 SPEGQ15772 3267 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 LOC105369274A0A096LPK9 316 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 LOC102723532A0A0G2JNH3 316 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 CDC14CA4D256 554 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 VSTM2BA6NLU5 285 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 CLDN4O14493 209 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 NDUFS4O43181 175 aa9.37□□□□□ -0.91
NR1I3-220ENST00000505005 RFPL1O75677 317 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms