RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 KCT2Q8NC54 265 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 NT5CQ8TCD5 201 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 C1QTNF3Q9BXJ4 246 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 CPNE5Q9HCH3 593 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 ZNF490Q9ULM2 529 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 PCDHGA6Q9Y5G7 932 aa16.97■□□□□ 0.31
CCHCR1-216ENST00000502557 CHD8Q9HCK8 2581 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 OR7A17O14581 309 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 FOXS1O43638 330 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SPAG7O75391 227 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 KATNA1O75449 491 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SERPIND1P05546 499 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 RAB40ALP0C0E4 278 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SLC35G6P0C7Q6 338 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 CREB1P16220 341 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 OR1D4P47884 311 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 PRKAA2P54646 552 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 HERVK_113P63132 956 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SLC9A5Q14940 896 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 NDUFA9Q16795 377 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 UNC50Q53HI1 259 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 PAGE2BQ5JRK9 111 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 C19orf48Q6RUI8 117 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ZYG11AQ6WRX3 759 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 CCDC81Q6ZN84 652 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 VN1R5Q7Z5H4 357 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 CROCCP2Q86T23 111 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SLC22A9Q8IVM8 553 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 TRPV3Q8NET8 790 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 CREB3L4Q8TEY5 395 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ZNF483Q8TF39 744 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SLC45A3Q96JT2 553 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 SMC6Q96SB8 1091 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 EFHD1Q9BUP0 239 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ERVK-6Q9BXR3 956 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 NOL11Q9H8H0 719 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ACTR8Q9H981 624 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ZBTB26Q9HCK0 441 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 ACSS2Q9NR19 701 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 PLLPQ9Y342 182 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 MRPS18BQ9Y676 258 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 MAU2Q9Y6X3 613 aa16.96■□□□□ 0.31
CCHCR1-216ENST00000502557 APC2O95996 2303 aa16.96■□□□□ 0.3
CCHCR1-216ENST00000502557 SDK2Q58EX2 2172 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ASPMQ8IZT6 3477 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 C9J4A7 227 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 MYL2P10916 166 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 IMPDH1P20839 514 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 TMPRSS3P57727 454 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 RGS1Q08116 209 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 HYAL2Q12891 473 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 FAM53BQ14153 422 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 CASP8Q14790 479 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 NCF4Q15080 339 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 HIST2H2ACQ16777 129 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 TNFAIP8L3Q5GJ75 292 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ZNF678Q5SXM1 525 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 HIST2H2AA3Q6FI13 130 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ADNP2Q6IQ32 1131 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 GRHL2Q6ISB3 625 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 PRMT9Q6P2P2 845 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 COX15Q7KZN9 410 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ENDOVQ8N8Q3 282 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 TTLQ8NG68 377 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 OR52B6Q8NGF0 335 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ZCCHC10Q8TBK6 192 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 RDH11Q8TC12 318 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 MVB12AQ96EY5 273 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 PGM2Q96G03 612 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 CRELD1Q96HD1 420 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 TMEM237Q96Q45 408 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 GPR87Q9BY21 358 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 DRC3Q9H069 523 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 CENPHQ9H3R5 247 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 SEMA4BQ9NPR2 832 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 SENP1Q9P0U3 644 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 IFT80Q9P2H3 777 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 KCND3Q9UK17 655 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 FARSAQ9Y285 508 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 ACACBO00763 2458 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 FREM2Q5SZK8 3169 aa16.95■□□□□ 0.3
CCHCR1-216ENST00000502557 A0A0A6YYC8 382 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 I3L1I5 382 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 K7ENP7 123 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 UGDHO60701 494 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 CNOT3O75175 753 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 SERPINA6P08185 405 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 CPA3P15088 417 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 H2AFXP16104 143 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 GSTM2P28161 218 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 PTPN4P29074 926 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 HNF4AP41235 474 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 CDH13P55290 713 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 RPS18P62269 152 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 RPS15P62841 145 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 VAC14Q08AM6 782 aa16.94■□□□□ 0.3
CCHCR1-216ENST00000502557 TRAF3Q13114 568 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms