RNA–Protein interactions for RNA: ENST00000496962.1

GGCX-210, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-210ENST00000496962 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
GGCX-210ENST00000496962 GRM7Q14831 915 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 NDUFA9Q16795 377 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 FAM214AQ32MH5 1076 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
GGCX-210ENST00000496962 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 NIPAL1Q6NVV3 410 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CEACAM20Q6UY09 585 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CHSY3Q70JA7 882 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
GGCX-210ENST00000496962 ASPGQ86U10 573 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 PPP1R3BQ86XI6 285 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CRLF3Q8IUI8 442 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CDYL2Q8N8U2 506 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 GBP7Q8N8V2 638 aaPredicted RBP12.5□□□□□ -0.41
GGCX-210ENST00000496962 ZNF740Q8NDX6 193 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 SRFBP1Q8NEF9 429 aaKnown RBP12.5□□□□□ -0.41
GGCX-210ENST00000496962 WDR20Q8TBZ3 569 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CCT6BQ92526 530 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 ZNF501Q96CX3 271 aaPredicted RBP12.5□□□□□ -0.41
GGCX-210ENST00000496962 TM4SF19Q96DZ7 209 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CMTM7Q96FZ5 175 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 C7orf26Q96N11 449 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 CDK15Q96Q40 435 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 TAAR9Q96RI9 348 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 BRF2Q9HAW0 419 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 PRM3Q9NNZ6 103 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 LOXL2Q9Y4K0 774 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
GGCX-210ENST00000496962 FITM1A5D6W6 292 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 TMEM150CB9EJG8 249 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 ITM2AO43736 263 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 PRAMEF10O60809 474 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 OR2B3O76000 313 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 CHRNGP07510 517 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 PCNAP12004 261 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 STXBP1P61764 594 aaKnown RBP12.49□□□□□ -0.41
GGCX-210ENST00000496962 SKP1P63208 163 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 OCRLQ01968 901 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 FOXM1Q08050 763 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 TGM3Q08188 693 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 CYP4F3Q08477 520 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
GGCX-210ENST00000496962 TMEM35AQ53FP2 167 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 SH2D4BQ5SQS7 431 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 PLD3Q8IV08 490 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 BMPERQ8N8U9 685 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 ANKRD53Q8N9V6 530 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 TTC29Q8NA56 475 aaPredicted RBP12.49□□□□□ -0.41
GGCX-210ENST00000496962 ZNF473Q8WTR7 871 aaKnown RBP12.49□□□□□ -0.41
GGCX-210ENST00000496962 SELENOMQ8WWX9 145 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 MOCOSQ96EN8 888 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 OR6C1Q96RD1 312 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 SERPINI1Q99574 410 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 DDA1Q9BW61 102 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 ACSS2Q9NR19 701 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 IRAK4Q9NWZ3 460 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 SLC39A1Q9NY26 324 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 SRPK3Q9UPE1 567 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 SPTBN4Q9H254 2564 aa12.49□□□□□ -0.41
GGCX-210ENST00000496962 A0A088AWK7 358 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 MANBAO00462 879 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 EIF2S1P05198 315 aaKnown RBP12.48□□□□□ -0.41
GGCX-210ENST00000496962 ZNF10P21506 573 aaPredicted RBP12.48□□□□□ -0.41
GGCX-210ENST00000496962 CCR10P46092 362 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
GGCX-210ENST00000496962 CUL3Q13618 768 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 KCNAB1Q14722 419 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 GPR19Q15760 415 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 PRTGQ2VWP7 1150 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 KANK2Q63ZY3 851 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 FRMPD2BQ6IN97 320 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 VN1R4Q7Z5H5 301 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.48□□□□□ -0.41
GGCX-210ENST00000496962 HUS1BQ8NHY5 278 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 USP7Q93009 1102 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 METTL2AQ96IZ6 378 aaKnown RBP12.48□□□□□ -0.41
GGCX-210ENST00000496962 SORT1Q99523 831 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 SPNS1Q9H2V7 528 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 POLR1BQ9H9Y6 1135 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 CLK4Q9HAZ1 481 aaKnown RBP12.48□□□□□ -0.41
GGCX-210ENST00000496962 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 AHSPQ9NZD4 102 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 SLC22A7Q9Y694 548 aa12.48□□□□□ -0.41
GGCX-210ENST00000496962 COL27A1Q8IZC6 1860 aaPredicted RBP12.47□□□□□ -0.41
GGCX-210ENST00000496962 LOC105369274A0A096LPK9 316 aa12.47□□□□□ -0.41
GGCX-210ENST00000496962 LOC102723532A0A0G2JNH3 316 aa12.47□□□□□ -0.41
GGCX-210ENST00000496962 A0A1B0GTL3 188 aa12.47□□□□□ -0.41
GGCX-210ENST00000496962 SLC28A1O00337 649 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms