RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CREB3L4Q8TEY5 395 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 C19orf60Q96EN9 201 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 THOC1Q96FV9 657 aaKnown RBP17.47■□□□□ 0.39
RGP1-202ENST00000496906 FAM107BQ9H098 131 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 NSRP1Q9H0G5 558 aaKnown RBP17.47■□□□□ 0.39
RGP1-202ENST00000496906 MEAF6Q9HAF1 191 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 DMRT3Q9NQL9 472 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 PPT2Q9UMR5 302 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 LOC105369274A0A096LPK9 316 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 LOC102723532A0A0G2JNH3 316 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 MAGEB17A8MXT2 336 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 FOXE1O00358 373 aaPredicted RBP17.46■□□□□ 0.39
RGP1-202ENST00000496906 MAP3K7O43318 606 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 CLEC3AO75596 197 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 TBX6O95947 436 aaPredicted RBP17.46■□□□□ 0.39
RGP1-202ENST00000496906 LINC00032P0C843 101 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 CDK4P11802 303 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 AQP5P55064 265 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 PHEXP78562 749 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 PHF19Q5T6S3 580 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 VWA5B1Q5TIE3 1220 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 OR4N4Q8N0Y3 316 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 TRPV3Q8NET8 790 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 RFWD2Q8NHY2 731 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 CCT7Q99832 543 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 SIKE1Q9BRV8 207 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 ACPTQ9BZG2 426 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 BRF2Q9HAW0 419 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 CCL27Q9Y4X3 112 aa17.46■□□□□ 0.39
RGP1-202ENST00000496906 SPAARA0A1B0GVQ0 90 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 TRPC5OSA6NMA1 111 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 H0YGG7 62 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 FTH1P19P0C7X4 201 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CEACAM1P13688 526 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 HSD3B1P14060 373 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 HSD3B2P26439 372 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 ARF3P61204 181 aaPredicted RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 RPS13P62277 151 aaKnown RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 KCNAB1Q14722 419 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CDCP2Q5VXM1 449 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 DHRS13Q6UX07 377 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CPLX4Q7Z7G2 160 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 ASPGQ86U10 573 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 MCATQ8IVS2 390 aaKnown RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 GBP7Q8N8V2 638 aaPredicted RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 OR2T11Q8NH01 316 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 TM4SF19Q96DZ7 209 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 PPP1R36Q96LQ0 422 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 C3orf30Q96M34 536 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 TMEM74Q96NL1 305 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 MS4A8Q9BY19 250 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 RABEP2Q9H5N1 569 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 KCNK13Q9HB14 408 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 DCTN4Q9UJW0 460 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CDV3Q9UKY7 258 aaKnown RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 PLCL2Q9UPR0 1127 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 SDHDO14521 159 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 NDUFS4O43181 175 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 ETHE1O95571 254 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 MSL3P1P0C860 447 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CCKBRP32239 447 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 HMGCS1Q01581 520 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 SLC9B1Q4ZJI4 515 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 TMTC4Q5T4D3 741 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 EPGNQ6UW88 154 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 Q6ZSR9 355 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 SLC13A3Q8WWT9 602 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 CCT6BQ92526 530 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 RERGQ96A58 199 aaPredicted RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 MAELQ96JY0 434 aaKnown RBP17.45■□□□□ 0.38
RGP1-202ENST00000496906 ZNF285Q96NJ3 590 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 PFDN4Q9NQP4 134 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 PSD3Q9NYI0 1048 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 KLHL14Q9P2G3 628 aa17.45■□□□□ 0.38
RGP1-202ENST00000496906 MDC1Q14676 2089 aaKnown RBP17.44■□□□□ 0.38
RGP1-202ENST00000496906 SLC28A1O00337 649 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 P2RX6O15547 441 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 SRPX2O60687 465 aaPredicted RBP17.44■□□□□ 0.38
RGP1-202ENST00000496906 TGFB1P01137 390 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 STATHP02808 62 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 SERPIND1P05546 499 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 SERPINA6P08185 405 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 FOLR1P15328 257 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 CLDN6P56747 220 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 VSX2P58304 361 aaPredicted RBP17.44■□□□□ 0.38
RGP1-202ENST00000496906 SIM1P81133 766 aaPredicted RBP17.44■□□□□ 0.38
RGP1-202ENST00000496906 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
RGP1-202ENST00000496906 HYAL2Q12891 473 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 PWP1Q13610 501 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 C16orf72Q14CZ0 275 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 IMPG1Q17R60 797 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 CAMKVQ8NCB2 501 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 NT5CQ8TCD5 201 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 CMTM7Q96FZ5 175 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 CCT8L2Q96SF2 557 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 ELAC2Q9BQ52 826 aaKnown RBP17.44■□□□□ 0.38
RGP1-202ENST00000496906 MACROD1Q9BQ69 325 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 EBF4Q9BQW3 602 aa17.44■□□□□ 0.38
RGP1-202ENST00000496906 PRM3Q9NNZ6 103 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms