RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 VPS4AQ9UN37 437 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TMEM98Q9Y2Y6 226 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PI15O43692 258 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SEMG1P04279 462 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PCCBP05166 539 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 KELP23276 732 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ELK4P28324 431 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 KDELR2P33947 212 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 GJA4P35212 333 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 LBX1P52954 281 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TPD52P55327 224 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 FCHO2Q0JRZ9 810 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PPP1R8Q12972 351 aaKnown RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 RUNX3Q13761 415 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 RFX4Q33E94 735 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TANGO2Q6ICL3 276 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PNCKQ6P2M8 343 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SHQ1Q6PI26 577 aaKnown RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ARMCX6Q7L4S7 300 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 AMZ2Q86W34 360 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 CHPFQ8IZ52 775 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 LMNTD1Q8N9Z9 388 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 OR4A15Q8NGL6 344 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ZFP90Q8TF47 636 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SETD7Q8WTS6 366 aaKnown RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 UBE2E3Q969T4 207 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 DPH2Q9BQC3 489 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SPNS1Q9H2V7 528 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 REEP4Q9H6H4 257 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 CERS4Q9HA82 394 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 IL1RAPQ9NPH3 570 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SH3BP4Q9P0V3 963 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 FZD4Q9ULV1 537 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PRKAB1Q9Y478 270 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PCYT1BQ9Y5K3 369 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PLXND1Q9Y4D7 1925 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 KAT7O95251 611 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 FABP3P05413 133 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 PIGAP37287 484 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 YAP1P46937 504 aaKnown RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 RAD23AP54725 363 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 CDK3Q00526 305 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 MEF2AQ02078 507 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 KCNAB2Q13303 367 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF385BQ569K4 471 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 OR2T5Q6IEZ7 315 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 CBLL1Q75N03 491 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 EIF3MQ7L2H7 374 aaKnown RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 R3HCC1LQ7Z5L2 792 aaKnown RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 LRRTM4Q86VH4 590 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 OXR1Q8N573 874 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 ARL10Q8N8L6 244 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 OR5AR1Q8NGP9 310 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 OR2T29Q8NH02 315 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 HSH2DQ96JZ2 352 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 IL17FQ96PD4 163 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 MYNNQ9NPC7 610 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 DDX18Q9NVP1 670 aaKnown RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 VNN3Q9NY84 501 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 ABCG2Q9UNQ0 655 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 EXO1Q9UQ84 846 aaKnown RBP12.54□□□□□ -0.4
GARNL3-220ENST00000496711 AP1M2Q9Y6Q5 423 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 U3KQV3 271 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 DOCK9Q9BZ29 2069 aa12.54□□□□□ -0.4
GARNL3-220ENST00000496711 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TGFB1P01137 390 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 RPN2P04844 631 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ABCB1P08183 1280 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PCSK6P29122 969 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TTKP33981 857 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 DRD3P35462 400 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PDE7AQ13946 482 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 RGNQ15493 299 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 GALNT10Q86SR1 603 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 METTL4Q8N3J2 472 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 HDAC2Q92769 488 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms