RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ARGFXA6NJG6 315 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 NDUFS4O43181 175 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 CCNT2O60583 730 aaKnown RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 KLF7O75840 302 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 ONECUT2O95948 504 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 FURINP09958 794 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 HPDP32754 393 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 BCL6P41182 706 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 SLC6A12P48065 614 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 GLRBP48167 497 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 NFKB2Q00653 900 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 MEF2AQ02078 507 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 DLG1Q12959 904 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 DSG2Q14126 1118 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 RBBP5Q15291 538 aaKnown RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 NKG7Q16617 165 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 CATSPEREQ5SY80 951 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 PCSK4Q6UW60 755 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 NXPE4Q6UWF7 544 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 APLFQ8IW19 511 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 CLEC1AQ8NC01 280 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 PDPRQ8NCN5 879 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 TTLQ8NG68 377 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 OR4K1Q8NGD4 311 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 C9orf43Q8TAL5 461 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 SCYL1Q96KG9 808 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 SLC25A18Q9H1K4 315 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 RRAGDQ9NQL2 400 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-209ENST00000496189 TRPC4Q9UBN4 977 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 MGAQ8IWI9 3026 aa15.58■□□□□ 0.08
SF3A1-209ENST00000496189 HEATR5BQ9P2D3 2071 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 A0A0A6YYC8 382 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 CCDC151A5D8V7 595 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 I3L1I5 382 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 KLHL41O60662 606 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 GFAPP14136 432 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 AHRP35869 848 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 GGT5P36269 586 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 GMPRP36959 345 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 GDF5P43026 501 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 HSPA7P48741 367 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 PWP1Q13610 501 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 COL9A2Q14055 689 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 HERC3Q15034 1050 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 RBBP7Q16576 425 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 PDK4Q16654 411 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 HIST2H2ACQ16777 129 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 HIST2H2AA3Q6FI13 130 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 LRRC70Q7Z2Q7 622 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 KLHDC8AQ8IYD2 350 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 EXD3Q8N9H8 876 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ZCCHC10Q8TBK6 192 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 EPS8L3Q8TE67 593 aaKnown RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ATOH8Q96SQ7 321 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 CRB3Q9BUF7 120 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 SARGQ9BW04 601 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 PITHD1Q9GZP4 211 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ING2Q9H160 280 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 SOX17Q9H6I2 414 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 MKKSQ9NPJ1 570 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-209ENST00000496189 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 OPTCQ9UBM4 332 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 CTSFQ9UBX1 484 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 DCDC2Q9UHG0 476 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ZFP69BQ9UJL9 534 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 PLAAQ9Y263 795 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 MAP4K5Q9Y4K4 846 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 ANGPTL3Q9Y5C1 460 aa15.57■□□□□ 0.08
SF3A1-209ENST00000496189 H0YIG0 161 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 P2RX6O15547 441 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 NSA2O95478 260 aaKnown RBP15.56■□□□□ 0.08
SF3A1-209ENST00000496189 GSTA1P08263 222 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 C1GALT1C1LP0DN25 315 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 MMP11P24347 488 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 GSTM2P28161 218 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 REEP5Q00765 189 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 LAPTM5Q13571 262 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 ATP1A4Q13733 1029 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 ZXDCQ2QGD7 858 aaPredicted RBP15.56■□□□□ 0.08
SF3A1-209ENST00000496189 PAGE2BQ5JRK9 111 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 FAM69BQ5VUD6 431 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 ABHD13Q7L211 337 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 VN1R4Q7Z5H5 301 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 MRGPREQ86SM8 312 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 CROCCP2Q86T23 111 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 OR2W6PQ8NHA6 318 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 STT3BQ8TCJ2 826 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 ADAMTS17Q8TE56 1095 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 GPR78Q96P69 363 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 MRPL57Q9BQC6 102 aaKnown RBP15.56■□□□□ 0.08
SF3A1-209ENST00000496189 EFCAB11Q9BUY7 163 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 CD244Q9BZW8 370 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 MRPL46Q9H2W6 279 aaKnown RBP15.56■□□□□ 0.08
SF3A1-209ENST00000496189 SLC22A11Q9NSA0 550 aa15.56■□□□□ 0.08
SF3A1-209ENST00000496189 PTBP2Q9UKA9 531 aaKnown RBP15.56■□□□□ 0.08
SF3A1-209ENST00000496189 UBXN8O00124 270 aa15.55■□□□□ 0.08
SF3A1-209ENST00000496189 MAP2K7O14733 419 aa15.55■□□□□ 0.08
SF3A1-209ENST00000496189 PCDH17O14917 1159 aa15.55■□□□□ 0.08
SF3A1-209ENST00000496189 LCMT2O60294 686 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms