RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TIAL1Q01085 375 aaKnown RBP eCLIP20.83■□□□□ 0.93
HDDC3-203ENST00000494993 CYP1B1Q16678 543 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.83■□□□□ 0.93
HDDC3-203ENST00000494993 ACER2Q5QJU3 275 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 FCRLBQ6BAA4 426 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 CCDC137Q6PK04 289 aaKnown RBP20.83■□□□□ 0.93
HDDC3-203ENST00000494993 AGTRAPQ6RW13 159 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 MBOAT1Q6ZNC8 495 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 PCGF5Q86SE9 256 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 ASPGQ86U10 573 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 PDSS2Q86YH6 399 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 BEST3Q8N1M1 668 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.83■□□□□ 0.93
HDDC3-203ENST00000494993 KCT2Q8NC54 265 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 EEF1AKMT1Q8WVE0 214 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 MS4A14Q96JA4 679 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 ATG10Q9H0Y0 220 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 PCDHGB6Q9Y5F9 930 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 KLF2Q9Y5W3 355 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-203ENST00000494993 LCMT2O60294 686 aaKnown RBP20.82■□□□□ 0.92
HDDC3-203ENST00000494993 RDH16O75452 317 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 CCND1P24385 295 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 GRNP28799 593 aaKnown RBP20.82■□□□□ 0.92
HDDC3-203ENST00000494993 RBPJQ06330 500 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 SP140Q13342 867 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 EXT1Q16394 746 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 MTFR2Q6P444 385 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 LCTLQ6UWM7 567 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 SLC26A11Q86WA9 606 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 SLC13A3Q8WWT9 602 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 PBKQ96KB5 322 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 NDNQ99608 321 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 SGPP1Q9BX95 441 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 FAM129AQ9BZQ8 928 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 KCNK13Q9HB14 408 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 PARVBQ9HBI1 364 aa20.82■□□□□ 0.92
HDDC3-203ENST00000494993 CDH1P12830 882 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 GRK3P35626 688 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 NAE1Q13564 534 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 CAPN13Q6MZZ7 669 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-203ENST00000494993 MRGPRGQ86SM5 289 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 CRLF3Q8IUI8 442 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 LRRC8AQ8IWT6 810 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 MCEMP1Q8IX19 187 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 PALM2Q8IXS6 379 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 MYO1HQ8N1T3 1032 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 ZNF808Q8N4W9 903 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-203ENST00000494993 C2CD4AQ8NCU7 369 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-203ENST00000494993 M1APQ8TC57 530 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 ALKBH8Q96BT7 664 aaKnown RBP20.81■□□□□ 0.92
HDDC3-203ENST00000494993 RUBCNLQ9H714 662 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 TAS2R13Q9NYV9 303 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 SH3BGRL2Q9UJC5 107 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 NAALAD2Q9Y3Q0 740 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 SLC22A7Q9Y694 548 aa20.81■□□□□ 0.92
HDDC3-203ENST00000494993 SLC16A5O15375 505 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 SLC35G6P0C7Q6 338 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 CCZ1BP86790 482 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 CCZ1P86791 482 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-203ENST00000494993 RHAGQ02094 409 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 DHX9Q08211 1270 aaKnown RBP20.8■□□□□ 0.92
HDDC3-203ENST00000494993 TUBA3CQ13748 450 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 CRYMQ14894 314 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 MEP1AQ16819 746 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 SFT2D3Q587I9 215 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 TUBA3EQ6PEY2 450 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PAPD4Q6PIY7 484 aaKnown RBP20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PAQR3Q6TCH7 311 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 RPTNQ6XPR3 784 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PPIL6Q8IXY8 311 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 MFSD9Q8NBP5 474 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 MDS2Q8NDY4 140 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PLPP5Q8NEB5 264 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PEX11GQ96HA9 241 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 SIGLEC12Q96PQ1 595 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 NPAS2Q99743 824 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 RBCK1Q9BYM8 510 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 MMP25Q9NPA2 562 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 PPP2R2CQ9Y2T4 447 aa20.8■□□□□ 0.92
HDDC3-203ENST00000494993 TTI1O43156 1089 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 WISP2O76076 250 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 NPPBP16860 134 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 PGAM1P18669 254 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 IL10P22301 178 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 ABRAXAS2Q15018 415 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 PHKG1Q16816 387 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 BNC2Q6ZN30 1099 aaPredicted RBP20.79■□□□□ 0.92
HDDC3-203ENST00000494993 GABPB2Q8TAK5 448 aaPredicted RBP20.79■□□□□ 0.92
HDDC3-203ENST00000494993 MOCOSQ96EN8 888 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 LINGO1Q96FE5 620 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 OR1F2PQ96R84 312 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 NAP1L3Q99457 506 aaPredicted RBP20.79■□□□□ 0.92
HDDC3-203ENST00000494993 LPAR4Q99677 370 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 UTP23Q9BRU9 249 aaKnown RBP20.79■□□□□ 0.92
HDDC3-203ENST00000494993 HAUS8Q9BT25 410 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 LANCL2Q9NS86 450 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 JRKLQ9Y4A0 524 aa20.79■□□□□ 0.92
HDDC3-203ENST00000494993 ZNF860A6NHJ4 632 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 MAGEB17A8MXT2 336 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 PGRMC1O00264 195 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms