RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TEX264Q9Y6I9 313 aa12.68□□□□□ -0.38
CTDSP1-212ENST00000494067 LOC102723996A0A087X1L8 192 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 E2F3O00716 465 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 TTI1O43156 1089 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 DNAJB6O75190 326 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 PIAS1O75925 651 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 LDLRP01130 860 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 AGTR2P50052 363 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 AP1S2P56377 157 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 MEF2AQ02078 507 aaPredicted RBP12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 NAE1Q13564 534 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 PCOLCEQ15113 449 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 INAQ16352 499 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 FAM45BPQ6NSW5 357 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 NIPAL1Q6NVV3 410 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 TMEM205Q6UW68 189 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 ASPGQ86U10 573 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 PDSS2Q86YH6 399 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 ANKMY2Q8IV38 441 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 GPATCH11Q8N954 259 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 OR51Q1Q8NH59 317 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 FAM45AQ8TCE6 357 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 SLC13A3Q8WWT9 602 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 PYCR2Q96C36 320 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 TM4SF19Q96DZ7 209 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 PDLIM2Q96JY6 352 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 SGPP1Q9BX95 441 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 OSGIN2Q9Y236 505 aa12.67□□□□□ -0.38
CTDSP1-212ENST00000494067 A0A1B0GUH1 482 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 WIPF3A6NGB9 483 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 SEC31AO94979 1220 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 B3GALT4O96024 378 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CRYABP02511 175 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CDH1P12830 882 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 NPPBP16860 134 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 IL1RNP18510 177 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 IL10P22301 178 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 SOX11P35716 441 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 TNFSF10P50591 281 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CCR8P51685 355 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 ITGA8P53708 1063 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 ZNF460Q14592 562 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 DUPD1Q68J44 220 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 TMEM214Q6NUQ4 689 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 KCT2Q8NC54 265 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 ZNF740Q8NDX6 193 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 LRRC39Q96DD0 335 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CYTH2Q99418 400 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 SMYD2Q9NRG4 433 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 PLA2G3Q9NZ20 509 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 STMN3Q9NZ72 180 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
CTDSP1-212ENST00000494067 HIVEP3Q5T1R4 2406 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 IGHV3-20A0A0C4DH32 117 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 URADA6NGE7 173 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 A8MUI8 341 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 SGK494L7N484 410 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 NDC80O14777 642 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 LRRTM2O43300 516 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 RASAL1O95294 804 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 F10P00742 488 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ENO2P09104 434 aaPredicted RBP12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ITGAMP11215 1152 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 PAFAH1B1P43034 410 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 XCR1P46094 333 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ARL4CP56559 192 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 GNG11P61952 73 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 DR1Q01658 176 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 SRSF11Q05519 484 aaKnown RBP12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ACTN3Q08043 901 aaPredicted RBP12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 CSHL1Q14406 222 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 HERC3Q15034 1050 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 EXT1Q16394 746 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 PPP1R3AQ16821 1122 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 SBSNQ6UWP8 590 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 SLC26A11Q86WA9 606 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 MFSD9Q8NBP5 474 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ZCCHC10Q8TBK6 192 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 RNF32Q9H0A6 362 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 HCN3Q9P1Z3 774 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
CTDSP1-212ENST00000494067 ESPL1Q14674 2120 aa12.64□□□□□ -0.39
CTDSP1-212ENST00000494067 OR5H15A6NDH6 313 aa12.64□□□□□ -0.39
CTDSP1-212ENST00000494067 C4orf51C9J302 202 aa12.64□□□□□ -0.39
CTDSP1-212ENST00000494067 OR1F1O43749 312 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms