RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 C7orf34Q96L11 122 aa18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 B3GALT6Q96L58 329 aa18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 FEVQ99581 238 aa18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 MGLLQ99685 303 aa18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 DPH2Q9BQC3 489 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 PCDHGB3Q9Y5G1 929 aa18.69■□□□□ 0.58
SNAPC3-206ENST00000490969 LOC105371267A0A1B0GV96 52 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 GABRB1P18505 474 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 HTR2BP41595 481 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 ARHGEF6Q15052 776 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 MED22Q15528 200 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 ZNF79Q15937 498 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 SDHAF4Q5VUM1 108 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 GLB1LQ6UWU2 654 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 RNF130Q86XS8 419 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 ELMOD2Q8IZ81 293 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 EFHBQ8N7U6 833 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 NELL1Q92832 810 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 MYEOVQ96EZ4 313 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 EGLN2Q96KS0 407 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 NTMT1Q9BV86 223 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 RUBCNLQ9H714 662 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 OARD1Q9Y530 152 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 A0A1W2PQ09 198 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 EFCAB10A6NFE3 127 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 STX7O15400 261 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 GPX5O75715 221 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 DSC1Q08554 894 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 TAB1Q15750 504 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 DENND6BQ8NEG7 585 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 C9orf43Q8TAL5 461 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 GON7Q9BXV9 100 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 BEX2Q9BXY8 128 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 OGDHLQ9ULD0 1010 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 VPS4AQ9UN37 437 aa18.68■□□□□ 0.58
SNAPC3-206ENST00000490969 ZSCAN5BA6NJL1 495 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 M0QZQ0 153 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 PRPS2P11908 318 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 IFNA8P32881 189 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 TRIM60Q495X7 471 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 TMPRSS11AQ6ZMR5 421 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 B3GNT7Q8NFL0 401 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 BBS2Q9BXC9 721 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 FAM126AQ9BYI3 521 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 TMEM184CQ9NVA4 438 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 MS4A12Q9NXJ0 267 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 PCDHGA2Q9Y5H1 932 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 A0A0D9SEW6 157 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 TBX18O95935 607 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 GPX2P18283 190 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 MAPKAPK2P49137 400 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 TEKQ02763 1124 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 PTPRRQ15256 657 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 MIB1Q86YT6 1006 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 DEPDC4Q8N2C3 294 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 CITED4Q96RK1 184 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 CCM2Q9BSQ5 444 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 CINPQ9BW66 212 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 SRRQ9GZT4 340 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 VWA8A3KMH1 1905 aa18.67■□□□□ 0.58
SNAPC3-206ENST00000490969 A0A0X1KG70 313 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 FPGTO14772 594 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 INPPL1O15357 1258 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 INSIG1O15503 277 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 EOMESO95936 686 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 PDYNP01213 254 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 HMBSP08397 361 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SDC1P18827 310 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 OR1G1P47890 313 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 KCNJ10P78508 379 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CD83Q01151 205 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 HYAL2Q12891 473 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SSX1Q16384 188 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CPSF6Q16630 551 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 KRT73Q86Y46 540 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CACTIN-AS1Q8N1I8 211 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 STK40Q8N2I9 435 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SLC5A8Q8N695 610 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 UTP15Q8TED0 518 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 PANX1Q96RD7 426 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 ARPC5LQ9BPX5 153 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 ASPNQ9BXN1 380 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 BARHL1Q9BZE3 327 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SLC22A4Q9H015 551 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 TIGARQ9NQ88 270 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 SCML2Q9UQR0 700 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CFAP20Q9Y6A4 193 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CCDC182A6NF36 153 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 M0R129 80 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 EPN2O95208 641 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 EPB42P16452 691 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 HOXD9P28356 352 aaPredicted RBP18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 RPS19P39019 145 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 KIR3DL1P43629 444 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 DMC1Q14565 340 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 DUOXA1Q1HG43 343 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 LAX1Q8IWV1 398 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 PSKH2Q96QS6 385 aa18.66■□□□□ 0.58
SNAPC3-206ENST00000490969 CNPPD1Q9BV87 410 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms