RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RDH16O75452 317 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 HAUS5O94927 633 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 C8GP07360 202 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 ESRRAP11474 423 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 SNRPNP63162 240 aaKnown RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 CSNK1G2P78368 415 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 MPP1Q00013 466 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 ACTN3Q08043 901 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 SP140Q13342 867 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 TUBA3CQ13748 450 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 CAPN13Q6MZZ7 669 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 TTC27Q6P3X3 843 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 TUBA3EQ6PEY2 450 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 BNC2Q6ZN30 1099 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 MYO1HQ8N1T3 1032 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 M1APQ8TC57 530 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 SLC13A3Q8WWT9 602 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 PHF12Q96QT6 1004 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 UTP23Q9BRU9 249 aaKnown RBP16.77■□□□□ 0.28
YIPF3-208ENST00000490447 GRPEL1Q9HAV7 217 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 PCDHGB6Q9Y5F9 930 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 CPAMD8Q8IZJ3 1885 aa16.77■□□□□ 0.28
YIPF3-208ENST00000490447 CDC123O75794 336 aaPredicted RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HIST1H2AGP0C0S8 130 aaPredicted RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 CD46P15529 392 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HIST1H2ADP20671 130 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HTR1EP28566 365 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 GRNP28799 593 aaKnown RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 PTGER4P35408 488 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 TAS2R50P59544 299 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 ABRAXAS2Q15018 415 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 NSDHLQ15738 373 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HSP90AA5PQ58FG0 334 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 H3F3CQ6NXT2 135 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 PAPD4Q6PIY7 484 aaKnown RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 CCDC137Q6PK04 289 aaKnown RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 AGTRAPQ6RW13 159 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 GDF7Q7Z4P5 450 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 PCGF5Q86SE9 256 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 SLC26A11Q86WA9 606 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 SPNS2Q8IVW8 549 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 SLC5A8Q8N695 610 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HORMAD2Q8N7B1 307 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 TMEM178AQ8NBL3 297 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 KCT2Q8NC54 265 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 FAM98AQ8NCA5 519 aaKnown RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 EEF1AKMT1Q8WVE0 214 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HIST1H2AHQ96KK5 128 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 NDNQ99608 321 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 LPAR4Q99677 370 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HIST1H2AJQ99878 128 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 H2AFJQ9BTM1 129 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 RBCK1Q9BYM8 510 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 ATG10Q9H0Y0 220 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 PARVBQ9HBI1 364 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 MMP25Q9NPA2 562 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 KLHL1Q9NR64 748 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 IARS2Q9NSE4 1012 aaKnown RBP16.76■□□□□ 0.27
YIPF3-208ENST00000490447 ANKRD10Q9NXR5 420 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 TAS2R13Q9NYV9 303 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 ADAMTS6Q9UKP5 1117 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 PDE10AQ9Y233 779 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 NAALAD2Q9Y3Q0 740 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
YIPF3-208ENST00000490447 OR2W5A6NFC9 320 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 CDH1P12830 882 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 COX6B1P14854 86 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 IL10P22301 178 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 COILP38432 576 aaPredicted RBP16.75■□□□□ 0.27
YIPF3-208ENST00000490447 SKP1P63208 163 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 ALDH6A1Q02252 535 aaKnown RBP16.75■□□□□ 0.27
YIPF3-208ENST00000490447 OC90Q02509 493 aaPredicted RBP16.75■□□□□ 0.27
YIPF3-208ENST00000490447 NAE1Q13564 534 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 HERC3Q15034 1050 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 OR1C1Q15619 314 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 SFT2D3Q587I9 215 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 XKRXQ6PP77 449 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 LCTLQ6UWM7 567 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 MBOAT1Q6ZNC8 495 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 TM4SF19Q96DZ7 209 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 SIGLEC12Q96PQ1 595 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 OR1F2PQ96R84 312 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
YIPF3-208ENST00000490447 SLC22A7Q9Y694 548 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 CSMD2Q7Z408 3487 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 APCP25054 2843 aa16.75■□□□□ 0.27
YIPF3-208ENST00000490447 ZNF860A6NHJ4 632 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 SLC16A5O15375 505 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 NDUFS4O43181 175 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 MAGEA3P43357 314 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 SMSP52788 366 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 ZNF630Q2M218 657 aaPredicted RBP16.74■□□□□ 0.27
YIPF3-208ENST00000490447 ZXDCQ2QGD7 858 aaPredicted RBP16.74■□□□□ 0.27
YIPF3-208ENST00000490447 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 PDSS2Q86YH6 399 aa16.74■□□□□ 0.27
YIPF3-208ENST00000490447 TBC1D19Q8N5T2 526 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms