RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PIK3R1P27986 724 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ATP5DP30049 168 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 CCND3P30281 292 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 HLA-FP30511 346 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 SOX3P41225 446 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 XGP55808 180 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 CDH18Q13634 790 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 MRGPRG-AS1Q2M3A8 158 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 TYSND1Q2T9J0 566 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 HLA-BQ31612 363 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 GBP6Q6ZN66 633 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 LINC00696Q6ZRV3 163 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 TUSC5Q8IXB3 177 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 OR7G3Q8NG95 312 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 UBLCP1Q8WVY7 318 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 ZNF486Q96H40 463 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 TSSK2Q96PF2 358 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 KRT12Q99456 494 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ATG101Q9BSB4 218 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 UTP14AQ9BVJ6 771 aaKnown RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 TMEM206Q9H813 350 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 PDRG1Q9NUG6 133 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 EXOC1Q9NV70 894 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 PANK4Q9NVE7 773 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ARGLU1Q9NWB6 273 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 BARHL2Q9NY43 387 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 HACD3Q9P035 362 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 NOCTQ9UK39 431 aaKnown RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 FBXL4Q9UKA2 621 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 GMEB2Q9UKD1 530 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 PA2G4Q9UQ80 394 aaKnown RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 NSG2Q9Y328 171 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 COLEC10Q9Y6Z7 277 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 NPHP3Q7Z494 1330 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 A0A0U1RQK1 487 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 ZNF320A2RRD8 509 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 SDR42E2A6NKP2 422 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 CTDSPLO15194 276 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 CYTIPO60759 359 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 CLDN1O95832 211 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 RNF224P0DH78 156 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 DLATP10515 647 aaKnown RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 TYMPP19971 482 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 AADACP22760 399 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 RBMS1P29558 406 aaKnown RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 OPRL1P41146 370 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 IER3P46695 156 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 OR3A1P47881 315 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 OR3A3P47888 321 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 OR1D5P58170 312 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 IRX6P78412 446 aaPredicted RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 TRA2AQ13595 282 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD46-216ENST00000490278 NFE2L1Q14494 772 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 TAB1Q15750 504 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 IQCCQ4KMZ1 466 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 ZNF542PQ5EBM4 170 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 CEP85LQ5SZL2 805 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD46-216ENST00000490278 C1QTNF12Q5T7M4 302 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 WLSQ5T9L3 541 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 KLHL10Q6JEL2 608 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 GSG1LQ6UXU4 331 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 ANKRD46Q86W74 232 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 TCEANCQ8N8B7 351 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 OR5T2Q8NGG2 359 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 CKAP2Q8WWK9 683 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 TEKT1Q969V4 418 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 NXPE2Q96DL1 559 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 VMP1Q96GC9 406 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 C2orf48Q96LS8 159 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 DESI2Q9BSY9 194 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 NACAP1Q9BZK3 213 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 RPF1Q9H9Y2 349 aaKnown RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 LIPT1Q9Y234 373 aa3.39□□□□□ -1.87
CD46-216ENST00000490278 EXOGQ9Y2C4 368 aaKnown RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 HBS1LQ9Y450 684 aaKnown RBP3.39□□□□□ -1.87
CD46-216ENST00000490278 MYH14Q7Z406 1995 aaKnown RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 ARID2Q68CP9 1835 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 A8MVM7 634 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 SLC1A7O00341 560 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 SLC33A1O00400 549 aaPredicted RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 SAP30O75446 220 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 EEF2P13639 858 aaKnown RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 ITIH1P19827 911 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 MMP12P39900 470 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 FRKP42685 505 aaPredicted RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 TSFMP43897 325 aaKnown RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 CETN1Q12798 172 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 SLMAPQ14BN4 828 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 DUSP5Q16690 384 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 CCDC184Q52MB2 194 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 CCDC158Q5M9N0 1113 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 BSPRYQ5W0U4 402 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 ZNF770Q6IQ21 691 aaPredicted RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 DHRS11Q6UWP2 260 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 Q6ZRP5 223 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms