RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MYL6BP14649 208 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 MYOGP15173 224 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 LBPP18428 481 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 EPORP19235 508 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 AADACP22760 399 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 KRTAP10-3P60369 221 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 PTENP60484 403 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 TNK1Q13470 666 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 RAPSNQ13702 412 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 FAM174BQ3ZCQ3 159 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 SPINK14Q6IE38 97 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 TTC27Q6P3X3 843 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 ZFAND4Q86XD8 727 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 LMNTD2Q8IXW0 634 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 METTL4Q8N3J2 472 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 CCDC63Q8NA47 563 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 IQUBQ8NA54 791 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 RAD54LQ92698 747 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 SOSTQ9BQB4 213 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 PARLQ9H300 379 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 MTHFD2LQ9H903 347 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-206ENST00000489868 RAB9BQ9NP90 201 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 GIMAP2Q9UG22 337 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 IL36AQ9UHA7 158 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 SPATA31D1Q6ZQQ2 1576 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 A0A087WZ39 114 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 PRSS46E5RG02 174 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 SLC1A7O00341 560 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 SNAP91O60641 907 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 DKC1O60832 514 aaKnown RBP eCLIP4.22□□□□□ -1.73
CCDC39-206ENST00000489868 THEGLP0DJG4 465 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 FDPSP14324 419 aaKnown RBP4.22□□□□□ -1.73
CCDC39-206ENST00000489868 PSMA3P25788 255 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 PSMB4P28070 264 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 MS4A2Q01362 244 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 DHODHQ02127 395 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 CD300CQ08708 224 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 ALDH1L2Q3SY69 923 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 CHMP1BQ7LBR1 199 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 AMIGO1Q86WK6 493 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 C17orf47Q8NEP4 570 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 LRRC15Q8TF66 581 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 ST6GALNAC6Q969X2 333 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 SLC45A3Q96JT2 553 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 RNF121Q9H920 327 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 GNB4Q9HAV0 340 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 LNPEPQ9UIQ6 1025 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 FBXL4Q9UKA2 621 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 ZNF510Q9Y2H8 683 aa4.22□□□□□ -1.73
CCDC39-206ENST00000489868 IGHV3-20A0A0C4DH32 117 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 HMGB1P1B2RPK0 211 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 SRRM5B3KS81 715 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 MAGEB2O15479 319 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 YES1P07947 543 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 ADRA2CP18825 462 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 EDNRAP25101 427 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 ETV5P41161 510 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 CDX1P47902 265 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 ZNF239Q16600 458 aaKnown RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 LRRC73Q5JTD7 316 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 TRAT1Q6PIZ9 186 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 LCLAT1Q6UWP7 414 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 TMEM182Q6ZP80 229 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 ADCK2Q7Z695 626 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 DNAJB7Q7Z6W7 309 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 SLFN11Q7Z7L1 901 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 LYG1Q8N1E2 194 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 AMER3Q8N944 861 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 HEXDCQ8WVB3 486 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 LGMNQ99538 433 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 MGME1Q9BQP7 344 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 IARS2Q9NSE4 1012 aaKnown RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 POMT2Q9UKY4 750 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 SNX7Q9UNH6 387 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 PA2G4Q9UQ80 394 aaKnown RBP4.21□□□□□ -1.74
CCDC39-206ENST00000489868 KLK4Q9Y5K2 254 aa4.21□□□□□ -1.74
CCDC39-206ENST00000489868 IGHV4-30-2A0A087WSY4 118 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 A0A087WV48 116 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-206ENST00000489868 ASB14A6NK59 587 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 TFECO14948 347 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-206ENST00000489868 FCGR3BO75015 233 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 LUC7L3O95232 432 aaKnown RBP4.2□□□□□ -1.74
CCDC39-206ENST00000489868 IGHV3-13P01766 116 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 SPP1P10451 314 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 PDGFRAP16234 1089 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 CLCN4P51793 760 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 CLDN17P56750 224 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 BTG1P62324 171 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 SULT2A1Q06520 285 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 ZNF177Q13360 481 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-206ENST00000489868 UGCGQ16739 394 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 FAM106AQ4KMX7 169 aa4.2□□□□□ -1.74
CCDC39-206ENST00000489868 C11orf57Q6ZUT1 292 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-206ENST00000489868 ZC3H3Q8IXZ2 948 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms