RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 IER3P46695 156 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 PPA1Q15181 289 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 SHQ1Q6PI26 577 aaKnown RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 BTNL8Q6UX41 500 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 MEX3DQ86XN8 651 aaKnown RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 LRTM2Q8N967 370 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 GOT1L1Q8NHS2 421 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 PARK7Q99497 189 aaKnown RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 RPF1Q9H9Y2 349 aaKnown RBP4.85□□□□□ -1.63
VPS26A-206ENST00000489794 SLCO1C1Q9NYB5 712 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 HACD3Q9P035 362 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 CSNK1G3Q9Y6M4 447 aa4.85□□□□□ -1.63
VPS26A-206ENST00000489794 IQCMA0A1B0GVH7 501 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 A0A1W2PR80 420 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 H0Y626 953 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 CCL24O00175 119 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 SLU7O95391 586 aaKnown RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 CGAP01215 116 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 PSMB4P28070 264 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ALDH1B1P30837 517 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 TLX1P31314 330 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 TCF7P36402 384 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 NPBWR1P48145 328 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 XGP55808 180 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 GSCP56915 257 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 DRP2Q13474 957 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 FAM46CQ5VWP2 391 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ZER1Q7Z7L7 766 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 APCDD1Q8J025 514 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 NHLRC2Q8NBF2 726 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 NUP37Q8NFH4 326 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ZNF486Q96H40 463 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ZNF300Q96RE9 604 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ARMCX3Q9UH62 379 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-206ENST00000489794 LNPEPQ9UIQ6 1025 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 ANGPTL3Q9Y5C1 460 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 KLK4Q9Y5K2 254 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 PRSS21Q9Y6M0 314 aa4.84□□□□□ -1.63
VPS26A-206ENST00000489794 RNF123Q5XPI4 1314 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SDR42E2A6NKP2 422 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 A8MVM7 634 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 KBTBD13C9JR72 458 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SURF4O15260 269 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SCO2O43819 266 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SELENOFO60613 162 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 RAD51DO75771 328 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SERPINB2P05120 415 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 GLULP15104 373 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 MYOGP15173 224 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 LBPP18428 481 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 PRKACGP22612 351 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SSTR1P30872 391 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 OPRL1P41146 370 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 SOX3P41225 446 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 IRX4P78413 519 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 CETN1Q12798 172 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 TMEM132DQ14C87 1099 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 E2F5Q15329 346 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 NHSL2Q5HYW2 709 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 FRRS1Q6ZNA5 592 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD46Q86W74 232 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 CCDC185Q8N715 623 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF519Q8TB69 540 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 UBLCP1Q8WVY7 318 aaPredicted RBP4.83□□□□□ -1.64
VPS26A-206ENST00000489794 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 RBM41Q96IZ5 413 aaKnown RBP4.83□□□□□ -1.64
VPS26A-206ENST00000489794 IL12RB2Q99665 862 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 LSG1Q9H089 658 aaKnown RBP4.83□□□□□ -1.64
VPS26A-206ENST00000489794 TUFT1Q9NNX1 390 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 TEX10Q9NXF1 929 aaPredicted RBP4.83□□□□□ -1.64
VPS26A-206ENST00000489794 WIPI2Q9Y4P8 454 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 RNF215Q9Y6U7 377 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 COLEC10Q9Y6Z7 277 aa4.83□□□□□ -1.64
VPS26A-206ENST00000489794 LOC105371242A0A075B767 164 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 IGKV3D-15A0A087WSY6 115 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 MTMR11A4FU01 709 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 PRSS46E5RG02 174 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 SUPT20HL2P0C7V6 817 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 DPEP1P16444 411 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 PIK3R1P27986 724 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 CLK1P49759 484 aaKnown RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 TMEM50BP56557 158 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 OR1D5P58170 312 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 TRA2AQ13595 282 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 MEP1BQ16820 701 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 FASTKD1Q53R41 847 aaKnown RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 ATP1A1-AS1Q5TC04 95 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF613Q6PF04 617 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 METTL7BQ6UX53 244 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 KIF6Q6ZMV9 814 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 CREBRFQ8IUR6 639 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 CROCCP3Q8IVE0 287 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 CKAP2Q8WWK9 683 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 CASP10Q92851 521 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms