RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PSMB5P28074 263 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 FMO4P31512 558 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CBSP35520 551 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 GRIA3P42263 894 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CD151P48509 253 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TLE1Q04724 770 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ACVR1Q04771 509 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 GPS1Q13098 491 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 RAPSNQ13702 412 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 GRB7Q14451 532 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 KCNJ11Q14654 390 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 IGFBP7Q16270 282 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 PCID2Q5JVF3 399 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CTSL3PQ5NE16 218 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 PLEKHS1Q5SXH7 462 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TMTC4Q5T4D3 741 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CNSTQ6PJW8 725 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 SPESP1Q6UW49 350 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 PACS1Q6VY07 963 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 BCL6BQ8N143 479 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 SLC35F6Q8N357 371 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 KLHL36Q8N4N3 616 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 AFAP1L2Q8N4X5 818 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 METTL27Q8N6F8 245 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ENDOVQ8N8Q3 282 aaKnown RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 LINC01555Q8NAE3 123 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 HEXDCQ8WVB3 486 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 FCRL4Q96PJ5 515 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 OR2A14Q96R47 310 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CD180Q99467 661 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TFB2MQ9H5Q4 396 aaKnown RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 MVB12BQ9H7P6 319 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 VPS37BQ9H9H4 285 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TREX1Q9NSU2 369 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ABCF3Q9NUQ8 709 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 IRAK4Q9NWZ3 460 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 LUZP4Q9P127 313 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 STOX2Q9P2F5 926 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 DHCR7Q9UBM7 475 aaKnown RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ADAM29Q9UKF5 820 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CDC42EP3Q9UKI2 254 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TLK1Q9UKI8 766 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CDYLQ9Y232 598 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 BTRCQ9Y297 605 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 TP53TG5Q9Y2B4 290 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 HEBP2Q9Y5Z4 205 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 PIEZO2Q9H5I5 2752 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 MED13Q9UHV7 2174 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 KALRNO60229 2985 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 GOLGA6L3A6NEY3 463 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 A6NL46 340 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 C2orf74A8MZ97 194 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 SUV39H1O43463 412 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CNOT3O75175 753 aaKnown RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 ALOX12BO75342 701 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 GPC4O75487 556 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 NDUFS3O75489 264 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CAPN1P07384 714 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CYP2A7P20853 494 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 MAGP20916 626 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 PKLRP30613 574 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 RORAP35398 523 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 GABRA4P48169 554 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CCL11P51671 97 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 PGGT1BP53609 377 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 RPA4Q13156 261 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CUL1Q13616 776 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 LAMB3Q13751 1172 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 FASTKQ14296 549 aaKnown RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 PRAMEF9Q5VWM5 478 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 MLIPQ5VWP3 458 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 FCRL6Q6DN72 434 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 PTRHD1Q6GMV3 140 aaKnown RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CASC4Q6P4E1 433 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 LRRC8BQ6P9F7 803 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 ZNF449Q6P9G9 518 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 DRICH1Q6PGQ1 229 aaPredicted RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 FAM198BQ6UWH4 519 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 LHFPL2Q6ZUX7 228 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 LARP4Q71RC2 724 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CAND1Q86VP6 1230 aaKnown RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 HOOK3Q86VS8 718 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 KMT5CQ86Y97 462 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 DENND6AQ8IWF6 608 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 REXO1L1PQ8IX06 675 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 SYTL1Q8IYJ3 562 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 SLC22A15Q8IZD6 547 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 DSELQ8IZU8 1212 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 AMER2Q8N7J2 671 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 TRIM58Q8NG06 486 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 OR5K2Q8NHB8 316 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 C9orf43Q8TAL5 461 aaPredicted RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 CHAC2Q8WUX2 184 aa5.67□□□□□ -1.5
CDHR3-213ENST00000488386 SKA2Q8WVK7 121 aaPredicted RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.67□□□□□ -1.5
CDHR3-213ENST00000488386 APOBEC4Q8WW27 367 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms