RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SNX19Q92543 992 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 SLCO4A1Q96BD0 722 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 GBP5Q96PP8 586 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 PKP2Q99959 881 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 KLHL4Q9C0H6 718 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 NT5DC2Q9H857 520 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 FBXL21Q9UKT6 434 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 PCOLCE2Q9UKZ9 415 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 AP3M1Q9Y2T2 418 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 PCDHB3Q9Y5E6 796 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 NUP214P35658 2090 aaPredicted RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 GBAP04062 536 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 GSNP06396 782 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 RPSAP08865 295 aaKnown RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 ATP6V1C1P21283 382 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 CDKN2CP42773 168 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 OGFRL1Q5TC84 451 aaPredicted RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 PROSER1Q86XN7 944 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 TMEM126BQ8IUX1 230 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 RLN3Q8WXF3 142 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 JPH3Q8WXH2 748 aaPredicted RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 NAF1Q96HR8 494 aaKnown RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 PRPF18Q99633 342 aaKnown RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 CPPED1Q9BRF8 314 aaPredicted RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 DUSP26Q9BV47 211 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 FOXQ1Q9C009 403 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 IKZF5Q9H5V7 419 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 MRPS30Q9NP92 439 aaKnown RBP16.03■□□□□ 0.16
CTSA-207ENST00000484855 MAGEL2Q9UJ55 1249 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 DHRS12A0PJE2 317 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 OR1F1O43749 312 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 ZNF217O75362 1048 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 TNFP01375 233 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 LAMP1P11279 417 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 HOXB9P17482 250 aaPredicted RBP16.02■□□□□ 0.16
CTSA-207ENST00000484855 PSMA4P25789 261 aaKnown RBP16.02■□□□□ 0.16
CTSA-207ENST00000484855 HNRNPFP52597 415 aaKnown RBP16.02■□□□□ 0.16
CTSA-207ENST00000484855 WNT3P56703 355 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 CSNK1G2P78368 415 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 FZD5Q13467 585 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 DUOXA1Q1HG43 343 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 GRAMD1BQ3KR37 738 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 CMPK2Q5EBM0 449 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 CPTPQ5TA50 214 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 IRAK1BP1Q5VVH5 260 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 FRMD1Q8N878 549 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 GOLM1Q8NBJ4 401 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 OR2T12Q8NG77 320 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 OR10A6Q8NH74 314 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 CANT1Q8WVQ1 401 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 MIEF2Q96C03 454 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 ZNF583Q96ND8 569 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 MS4A8Q9BY19 250 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 AHSPQ9NZD4 102 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 ZNF624Q9P2J8 865 aaPredicted RBP16.02■□□□□ 0.16
CTSA-207ENST00000484855 MCM8Q9UJA3 840 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.16
CTSA-207ENST00000484855 IGKV1-8A0A0C4DH67 115 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 FAM170BA6NMN3 283 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 KLK1P06870 262 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 PIM1P11309 404 aaPredicted RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 F3P13726 295 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 HRH2P25021 359 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 PTPN6P29350 595 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 PEBP1P30086 187 aaKnown RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 SHMT2P34897 504 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 NUDT1P36639 197 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 TRPC1P48995 793 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 ILF3Q12906 894 aaKnown RBP eCLIP16.02■□□□□ 0.15
CTSA-207ENST00000484855 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 SWT1Q5T5J6 900 aaKnown RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 KHDRBS2Q5VWX1 349 aaKnown RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 NRROSQ86YC3 692 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 FAM160A2Q8N612 972 aaPredicted RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 LCN9Q8WX39 176 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 AURKBQ96GD4 344 aaPredicted RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 GUCD1Q96NT3 240 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 PANX1Q96RD7 426 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 INVSQ9Y283 1065 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 BTBD3Q9Y2F9 522 aa16.02■□□□□ 0.15
CTSA-207ENST00000484855 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.02■□□□□ 0.15
CTSA-207ENST00000484855 MDC1Q14676 2089 aaKnown RBP16.01■□□□□ 0.15
CTSA-207ENST00000484855 IGHV1OR15-9A0A0B4J2B8 117 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 A6NCN8 305 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 GABRR3A8MPY1 467 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 PRICKLE3O43900 615 aaPredicted RBP16.01■□□□□ 0.15
CTSA-207ENST00000484855 SCN2BO60939 215 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 SEMA3DO95025 777 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 CCNDBP1O95273 360 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 TBX6O95947 436 aaPredicted RBP16.01■□□□□ 0.15
CTSA-207ENST00000484855 ABATP80404 500 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 GLYATQ6IB77 296 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 AMIGO1Q86WK6 493 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 TNIP2Q8NFZ5 429 aa16.01■□□□□ 0.15
CTSA-207ENST00000484855 C16orf78Q8WTQ4 265 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms