RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 DMRT3Q9NQL9 472 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 OCIAD1Q9NX40 245 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 PSD3Q9NYI0 1048 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.14□□□□□ -1.43
NCL-209ENST00000484328 RAP2CQ9Y3L5 183 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 PCDHGA3Q9Y5H0 932 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 PCDHGA11Q9Y5H2 935 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 DNAJC15Q9Y5T4 150 aa6.14□□□□□ -1.43
NCL-209ENST00000484328 CEP295Q9C0D2 2601 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 A0A0J9YVX5 310 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 EFCAB7A8K855 629 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 C4orf51C9J302 202 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 H0YGG7 62 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 MANBAO00462 879 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TXNDC9O14530 226 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 PLD2O14939 933 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 AZIN1O14977 448 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ZSCAN9O15535 394 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 MAP3K7O43318 606 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 OR1F1O43749 312 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 OR2B3O76000 313 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 DXOO77932 396 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 TIAF1O95411 115 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HSPA4LO95757 839 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CTSBP07858 339 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 SLC35G6P0C7Q6 338 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 UROSP10746 265 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HSD3B1P14060 373 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ITIH1P19827 911 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 PRPH2P23942 346 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HSD3B2P26439 372 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HNRNPH1P31943 449 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 MDH1P40925 334 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 ETV5P41161 510 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ID4P47928 161 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 SLC1A6P48664 564 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ARL4DP49703 201 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HK2P52789 917 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ARFIP1P53367 373 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 VSX2P58304 361 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 ARF3P61204 181 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 CYP4F3Q08477 520 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CSTF3Q12996 717 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 TARDBPQ13148 414 aaKnown RBP eCLIP6.13□□□□□ -1.435e-21■□□□□ 10.1
NCL-209ENST00000484328 STX3Q13277 289 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CUL3Q13618 768 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 RTP5Q14D33 572 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CPSF6Q16630 551 aaKnown RBP eCLIP6.13□□□□□ -1.435e-29■■□□□ 11.6
NCL-209ENST00000484328 HIST2H2ACQ16777 129 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 HKDC1Q2TB90 917 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 UGT3A2Q3SY77 523 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
NCL-209ENST00000484328 XKR7Q5GH72 579 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TCTE1Q5JU00 501 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TCHHL1Q5QJ38 904 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 SH2D4BQ5SQS7 431 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 MANEAQ5SRI9 462 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 FAM219BQ5XKK7 198 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HIST2H2AA3Q6FI13 130 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TMEM214Q6NUQ4 689 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 MILR1Q7Z6M3 343 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 MYLK4Q86YV6 388 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 AFAP1L2Q8N4X5 818 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CSNK1A1LQ8N752 337 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ZNF781Q8N8C0 355 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CDYL2Q8N8U2 506 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 HUS1BQ8NHY5 278 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 WDR36Q8NI36 951 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 PPP1R14CQ8TAE6 165 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 METTL6Q8TCB7 284 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 LRRC8CQ8TDW0 803 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 PMEPA1Q969W9 287 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ATP6V1E2Q96A05 226 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 RERGQ96A58 199 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 C11orf24Q96F05 449 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 C10orf90Q96M02 699 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TEFMQ96QE5 360 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 ZNF717Q9BY31 904 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 SPRY4Q9C004 299 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 NRSN2Q9GZP1 204 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 AICDAQ9GZX7 198 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 TUBB1Q9H4B7 451 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ELOVL6Q9H5J4 265 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 BRF2Q9HAW0 419 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 FANCEQ9HB96 536 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 APMAPQ9HDC9 416 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 THAP1Q9NVV9 213 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 AKAP7Q9P0M2 348 aaPredicted RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 ADGRE2Q9UHX3 823 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ZDHHC2Q9UIJ5 367 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 ACSL6Q9UKU0 697 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 SNX6Q9UNH7 406 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 SATB2Q9UPW6 733 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 RUVBL1Q9Y265 456 aaKnown RBP6.13□□□□□ -1.43
NCL-209ENST00000484328 TRAF6Q9Y4K3 522 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 CCL27Q9Y4X3 112 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 PCDHB3Q9Y5E6 796 aa6.13□□□□□ -1.43
NCL-209ENST00000484328 PCDHGA7Q9Y5G6 932 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms