RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SERPINB8P50452 374 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RPS15AP62244 130 aaKnown RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CDC16Q13042 620 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ZRSR2Q15696 482 aaKnown RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CROCCQ5TZA2 2017 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 IRAK1BP1Q5VVH5 260 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 GARNL3Q5VVW2 1013 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 SUSD1Q6UWL2 747 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RAPH1Q70E73 1250 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 FRA10AC1Q70Z53 315 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 FJX1Q86VR8 437 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 PAQR7Q86WK9 346 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 TBC1D19Q8N5T2 526 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ABHD11Q8NFV4 315 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RHEBL1Q8TAI7 183 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 STAG3L4Q8TBR4 150 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ANKRD49Q8WVL7 239 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ISL2Q96A47 359 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RERGQ96A58 199 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 KIAA1191Q96A73 305 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 MTBPQ96DY7 904 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 MVB12AQ96EY5 273 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 BARD1Q99728 777 aaKnown RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RHOXF2Q9BQY4 288 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 SARGQ9BW04 601 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CNOT10Q9H9A5 744 aaKnown RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ENTPD4Q9Y227 616 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 IGKV1-8A0A0C4DH67 115 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SYCE1LA8MT33 242 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 AGPSO00116 658 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 CDC7O00311 574 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 RIPK2O43353 540 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PIAS1O75925 651 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 ALBP02768 609 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 LTA4HP09960 611 aaKnown RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SLC35E2BP0CK96 405 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 COL6A2P12110 1019 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 NPPBP16860 134 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PSMB5P28074 263 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 MSH2P43246 934 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 AIMP2Q13155 320 aaKnown RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 NAE1Q13564 534 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 ZNF460Q14592 562 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 ACAP2Q15057 778 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 TGFBIQ15582 683 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 FAM83EQ2M2I3 478 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 NKAIN1Q4KMZ8 207 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 AGAP7PQ5VUJ5 663 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SULT1C3Q6IMI6 304 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 METTL2BQ6P1Q9 378 aaKnown RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PRMT9Q6P2P2 845 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 FBXO42Q6P3S6 717 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 KLC3Q6P597 504 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 LCA5Q86VQ0 697 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 C17orf64Q86WR6 236 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 MCEMP1Q8IX19 187 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PDPRQ8NCN5 879 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PPFIBP2Q8ND30 876 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 OR4K1Q8NGD4 311 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PPP4R1Q8TF05 950 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 FAR1Q8WVX9 515 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 NACC2Q96BF6 587 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 CABS1Q96KC9 395 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 AGAP4Q96P64 663 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 OR2A5Q96R48 311 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PAFAH2Q99487 392 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 CCDC77Q9BR77 488 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 ACAT2Q9BWD1 397 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 TXLNGYQ9BZA5 131 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 PITHD1Q9GZP4 211 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-213ENST00000484112 CAB39LQ9H9S4 337 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 SLC6A20Q9NP91 592 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 GPRC5BQ9NZH0 403 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 FBXL4Q9UKA2 621 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 KCNE2Q9Y6J6 123 aa9.51□□□□□ -0.89
CPSF4-213ENST00000484112 EXOC1LA0A1B0GW35 172 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 A0A1B0GX78 115 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 KRT87PA6NCN2 255 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 NPEPPSL1A6NEC2 478 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 E2F3O00716 465 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 DSCR3O14972 297 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 PRPF4O43172 522 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 PHGDHO43175 533 aaKnown RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CTSVO60911 334 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 KERAO60938 352 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 FAM155BO75949 473 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 KLHL2O95198 593 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 GUCA1CO95843 209 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TUBBP07437 444 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 EDN3P14138 238 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CXCR2P25025 360 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 GSTM2P28161 218 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TYK2P29597 1187 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 MAGEA12P43365 314 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CCR8P51685 355 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms