RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CSRP3P50461 194 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 RRADP55042 308 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 RGS1Q08116 209 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 PWP1Q13610 501 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 PDK4Q16654 411 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 SLCO4C1Q6ZQN7 724 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 SHISA6Q6ZSJ9 500 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 APLFQ8IW19 511 aaPredicted RBP17.47■□□□□ 0.39
SMIM4-204ENST00000482728 KCT2Q8NC54 265 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 STT3BQ8TCJ2 826 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMIM4-204ENST00000482728 MIEF2Q96C03 454 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 ATOH8Q96SQ7 321 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 TMEM79Q9BSE2 394 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 TXLNGYQ9BZA5 131 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 SEMA4CQ9C0C4 833 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 ING2Q9H160 280 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 SOX17Q9H6I2 414 aaPredicted RBP17.47■□□□□ 0.39
SMIM4-204ENST00000482728 ANKHQ9HCJ1 492 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 ACSS2Q9NR19 701 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 MED13Q9UHV7 2174 aa17.47■□□□□ 0.39
SMIM4-204ENST00000482728 VSTM2BA6NLU5 285 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MAP2K7O14733 419 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 FOXS1O43638 330 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 IGHEP01854 428 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 UMODP07911 640 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 ZGLP1P0C6A0 271 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 GFAPP14136 432 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 CCL11P51671 97 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 FOXL2P58012 376 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 REEP5Q00765 189 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 C19orf57Q0VDD7 668 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 ATP1A4Q13733 1029 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 ATG9BQ674R7 924 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 TMEM214Q6NUQ4 689 aaKnown RBP17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MED25Q71SY5 747 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MRGPREQ86SM8 312 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 PRSS58Q8IYP2 241 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 KRT78Q8N1N4 520 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 ARHGEF39Q8N4T4 335 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 TMEM102Q8N9M5 508 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-204ENST00000482728 TRPV3Q8NET8 790 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 OR9A4Q8NGU2 314 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 C9orf43Q8TAL5 461 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-204ENST00000482728 ZCCHC10Q8TBK6 192 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 NACC2Q96BF6 587 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MTBPQ96DY7 904 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 VPS50Q96JG6 964 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 SCYL1Q96KG9 808 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 SPSB2Q99619 263 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 SPNS1Q9H2V7 528 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MKKSQ9NPJ1 570 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-204ENST00000482728 OPTCQ9UBM4 332 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MRPS2Q9Y399 296 aaKnown RBP17.46■□□□□ 0.39
SMIM4-204ENST00000482728 MAP4K5Q9Y4K4 846 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 SLC22A7Q9Y694 548 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 SCN3AQ9NY46 2000 aa17.46■□□□□ 0.39
SMIM4-204ENST00000482728 H0YIG0 161 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
SMIM4-204ENST00000482728 NSA2O95478 260 aaKnown RBP17.45■□□□□ 0.38
SMIM4-204ENST00000482728 RBP1P09455 135 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 MYBL2P10244 700 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 COL6A2P12110 1019 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 MMP11P24347 488 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 TNFRSF8P28908 595 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 MAGEA12P43365 314 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 SKP1P63208 163 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 CHAF1BQ13112 559 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 SLBPQ14493 270 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMIM4-204ENST00000482728 HERC3Q15034 1050 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 TSNAXIP1Q2TAA8 658 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 VWA2Q5GFL6 755 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 XKR6Q5GH73 641 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 ADGRD1Q6QNK2 874 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 TMIGD1Q6UXZ0 262 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 LRRC70Q7Z2Q7 622 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 CNPY4Q8N129 248 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
SMIM4-204ENST00000482728 ISL2Q96A47 359 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 MOCOSQ96EN8 888 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 ABHD17AQ96GS6 310 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 FER1L6-AS2Q96M78 137 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 GPR78Q96P69 363 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 CRB3Q9BUF7 120 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 SLC25A18Q9H1K4 315 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 EHD1Q9H4M9 534 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 PRM3Q9NNZ6 103 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 SEMA3GQ9NS98 782 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 P4HTMQ9NXG6 502 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 ANGPTL3Q9Y5C1 460 aa17.45■□□□□ 0.38
SMIM4-204ENST00000482728 KALRNO60229 2985 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 IQANK1A0A1B0GTG1 560 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 URADA6NGE7 173 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 FFAR3O14843 346 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 GPR42O15529 346 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 DNAJB5O75953 348 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 IL1RNP18510 177 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 AGTR2P50052 363 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 IRF8Q02556 426 aa17.44■□□□□ 0.38
SMIM4-204ENST00000482728 KLC1Q07866 573 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms